Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi324g00033 ATGGATCCAGAAAGATCAGTAGAGGACCAGTTCTCCAAACTACATCCTTCCTTGCCAGTAAACACCAGAATTGGAATAGTGGGTGGTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTAGCCAGGCTTGGTTATGAGAATGTCACAGTATTGGAGAAACATCATACTGTTGGTGGCATGTGTGAATCAGTGGAAATTCAAGGAAAAGTTTATGATCTTGGGGGGCAAGTTCTTGCTGCAAGCAGTGCTCCAATCATCTTTCACTTGGCAAAAGAGACAGGCTCTGCGCTAGAAGAAATGGACTCTCACAAACTTGCTGTTATTGACCCTTCCTCTGGAGAATATCAAGATATTAAAGTTGTTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATACAAGAAAAGGTGAAGAACTGTGGCCGTATTGGGGTCCATGCTGTGAGTGACATTGCTGCAGACTTAACTCCAGAGTATCTTGAGTGTCATGGGCTCAAATCCATTCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGGTTTGTTCAAGACATGCCTTATGCCTACCTTCATGAATTTACTAGAACATCCATGGCAGGAAAAATTAGACGGTTTAAAGGTGGATATATGAGCCTTTGGCAAAAGATTGCTGAATCACTTCCTTTAAAACTCCGCTGTAACACTGAAGTATTGGCAATCAGGAGGAACTCTGATGGTGTCACTGTTGATGTCAAGAGCTTAGATGAAGTTGAAACTTTGGAATTTGATAAGATCATAATCTCTGGTCCATTTCCATTAAAATATGGAAGAATTTACAGATCATTGCCTTCAACTTGCATAGAATGTGAAAAGGAAGTAATGGATGTAAGTGAACTTGAAAAGGATTTGTTCAGCAAAGTGGAGACAAATGACTACTACACCACTGTTTTAAAGATTAAAGGGCTAGAACATTTGCCTGTTGGATTTTATTATATTAGTGAATATATGGAAGATCCCAGCACGATTGGAAATCCAGTTGCAATGCAGAAATATTATGCTGACACTAATATATTCTTGTTCTGGTCCTATGGAAACTCTGTTGATATTAAGGGGCCAACTGTCAAGGAGCTTGCGATCAAGGCAATAGAAGCTATGGGGGATATGAAAGATGGTTTCTATGAAAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTACTATGTAGGTGGCCTTATGGCGTTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTCTGATGTGCAAGAACTTTGCAAATAGCAATGATTTGCCATTATTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGAGTGCCAGAACAAGAATCCTAAAGAATTAGGTGAATTGCCAGAAGTGCAATTTCCTAATTTGCCTACACTGAATAGCTACTTAAAGTACTGGGGAACTCATCCAATCACTCAAAACAGGACTCTTTATACTTGGATTAATGAAGAAGGGTCTCCAGTATGCCACAGGACCTATGGAGAACAGCATTTTAATGCTTCTTGCATTGCTCATAAGCTCTTAACAAGCCAAAAGCCAGTTATCAAGCCTGGTGACAGGGTTCTCCTGGTCTATGTCCCCGGTTTGGATTTCATCGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTCCCCGTTCTTCCCCCAGATCCCATGCAAAGAAGTGGGCAAGCCCTAATGAAAATTGAAAATATTTCCAAGTCATGTGGCATAGTGGCAATTTTGTCAACAGTAGCTTATCACTCAGCAGTCCGTGCAGGTTCATTGAAAAACTTCATTTCATTAACTGGAAAAAAGGGGAAATCATCAGCAAGGTGGCCGAATCTTCCATGGTTTCATACTGATACTTGGGTCAAGAACTCCAAAAGTATGGTTTTGGAAAATCTTGATGATCAATGTGAACCTCAGCCTGGTGACTTGTGTTTCTTGCAATTTACATCAGGATCAACTGGTGATGCTAAAGGAGTCATGATCTCTCATGGTGGGCTTATTCACAATGTAAAGTTGATGAGAAGTAGATACAAGAGCATCTCAAGGACAGTGCTAGTAAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGGGGACTTTTTACATCTCTTGTCAGTGGTGGATCTGCAGTTTTGTTTTCACCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATCAGCAAGTATCAAGCAACTCATAGTGCTGGCCCTAACTTTGCCTTTGAGTTAGTGATTCGAAGATTGGAGTCTGACAAGGATAAGCTCCAGAATTTAGACCTTTCATCCTTGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCTTGAAAAGATTCATTGAGTTAACCAGTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTAAGTTGTGCATTTGGAGAAGGTAAGCCTATTATTGTTGATTGGCAGGGAAGAGTTTGTTGTGGCTATTTTCATCCAGAGGATGCAGATGTTGACATTAGAATAGTTGATCCACAGACTTGTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATATGGATCAGTAGTCCAAGTGCAGGACTAGGATACTGGGGAAGGGAAGAATTGAGTCAAGAAACTTTCAGGAATGAACTTCAGAATCATCCTGGACGCAACTACACAAGAACTGGAGACCTGGGAAGAACAATAGATCAGAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATGTTTACTCAGCAGATGTTGAAAAGACAGTTGAGACTTCATCTGAATTTCTTCGTCCTGGTTGTTGTGCTGTTGTTGGTGTCCCTGAGGAAATTCTATCAGCAAAGGGGATTTCTATTCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAACAAGTTAGCAAAGATTTGATTGAGAATATTAAGACATGTGTGGCAGAAGAACATGGAGTTAGTGTTGCTTCTGTCAAGTTGGTCAAGCCTAGAACCATCAGCAAAACAACATCTGGAAAAATCAAAAGATTTGAATGTATCAAACAGTTCACAGATGAGACACTGAACTTGGTACCACTAGGTCAAAAACCTGTTTTCACAAAGAACTCTTTGGTAAGGTCATTTACTACAGCAACATGCAGAGAAGAAAAACCACGCCAGCCCAAGCTAGTGAGAAGTATACCTGCACCTAGTAAAAGGATTAGTAAAAATGACATTGTAGAGTTCTTAAAAGGGCTTATTTCTGAGCAGACTGGAATCCCAATCAACAACATTTCAGTCACAGACAACCTGACATCCTATGGAATTGATTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTTCTAGGAACTCCAGTTGCAGCTATAGATGTTTTCACTGCATCCTGCATTGTAGAATTGGCTAACTTCTCTGAGGATCTTATATCAAAGGCTCAGCCTCAGCTTTCAAGCAATCCATCCAATGTTCTAGAAGATGAGGTTGATTCTACAGAATTGGTTGTGGAGGTACCCAAGTCTCACCAATTCGGTATTCGTTTACTTCAACTCCTAGCACTTTTTTATATTTCTATAATGCTGGCCTCTCCTGCTTATCTATCCATCACTGCTTTTCTAAATTTCTTCCAAAGTGCCAGCAAATCAATTGATGGAGTTCCCTGGTTAAATTATTTGATTTCCCTTACTTTTGCACCTCTTGCTTGGATTCTTTGCATTGCTTCTACTTGCATCTGCATCTCAATATTTGGAAGTGCTTTCTTGGGGCTAAACTATGCTCTTACCTCTGAAATCTCTATCTATTCAATGGATTTTATTAAATGGTGGGCACTATATAAGACCCGAGAAATTGCCTCTAAAGTTCTTGCAATACACCTCAGAGGAACAGTGTTTCTGAACTACTGGTTTGAGATGTTGGGTGCAAGAGTTGGATCCTCAGTGTTGCTTGATACAGTTGACATCACAGACCCATCTCTGGTGTCAATTGGAGATGAAGCTATCATTGCAGAAGGTGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTTTAAGTTTCCATCCTATAAGGATTGGCAAATATTCTTCTATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTGGAGAAGGTGCTGAGGTACAGGCGTTGCAAAAAGTTGGAGGAGGCCACCATGTGCTCAAATCTGCTAAGCTTAATAATGTTGATAAGAATGCAGAGCTGCATGTTACTACCAGCAAAACTCAATATGATATCTACCACTTTATGGGGATCTATCTTGTTGGCTTTCTCAGCTCCCTTGCTGGGGCCATTGCCTACTTCTTATATATCAGATTCTCCAAGCAACCTCTATCACTCCAACAATTTTCATTTGTTTGCATATGTGGGGCCTTCCACTGGATCCCATTTACCATCATTGCATATGCAACCATGTTTTCTGATGTCCCATCAAATCCAATCACCTTTGCCATTTCATTTACCAGTGCCTACTTGCTTCATGGTCTCATACTCATCATTCTCACCAGTGCTTTTACTCGTCTCCTCATGTCTAATCAAAAGCAAACCCAATTTAAAACCTGGCTTCGCTATCAAATAACCTCTTCCTGCCATCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCTATCAACCCAGTTTCAAATCCAGAGCTATTGTCAATTGGTGAGGGTGTCCATCTTGGAGATTTTAGCCGGATAATTACTGGTTTTCATTCTTCCAATGGATATGCTTGTGGAAAAATTGAGGTTCAAGATAATTCAGTTATTGGGAGTCAAAGCTTGATTCTCCCTGGTTCTCTTGTACAAAAGAATGTCATTCTGGATGAGAGGGACATGGAATGCAAGAAAAAAGTTGATAATTTGGCTGCAGCAATATTACCTAAAGAAGACTCACAAAAAGTGACCTTGAGCAGAACATGGTATCAGACCCTCTCAGCACTCTTCATTCAGCCGTTGCTACAAACTGTTTTACCTTATGCCATAGTGGGTTTAGCAGTTTTTGTTCCTTTGAACTGGATTGTTCACCTAAAAAATGCCAAGATACTTCCAATCTATTGGTTGTTTCCTTTGTGTTGGGTTCTCTCGGGTGCTTTAGCTGCATTGGCGTGTGTTATAGCCAAATGGGTTCTTGTGGGAAGGAAGAAAGCAGGTGAAACAGTGCCAATATGGAGTCCAAGGATCATCATGGACAGCACATGGCAGGCCATTAGAACTTTAGTTGGAGATTATTTTATGGACATGACAAGTGGGTCATTTTTGTTTGTCCTATGGATGAAGTTGATGGGCGCAGATGTAGATATGGATGATGCAGTTTATGTAGATAGCATGGGAGCCTTATTAAACCCTGAGATGGTGAAGATTGAAAGAGGGGGTTGTGTAGGAAGAGAAGCCTTGTTGTTTGGACATATATATGAAGGGGAAGGAGGTATGGTAAAGTTTGGAGAGATCAAAATAGGAGAAGATGGGTTTATAGGGAGTAGAGCTGTGGCCATGCCAGGGGTGCAATTGGAGAATGAGGGCAATCTTAGTGCTCTGTCACTTGCCATGAAAGAAGAAATCATTAGATCAAGATAA 5757 0.4061 MDPERSVEDQFSKLHPSLPVNTRIGIVGGGPSGLSAAYALARLGYENVTVLEKHHTVGGMCESVEIQGKVYDLGGQVLAASSAPIIFHLAKETGSALEEMDSHKLAVIDPSSGEYQDIKVVDDYVSVMSLTLEIQEKVKNCGRIGVHAVSDIAADLTPEYLECHGLKSIPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKGGYMSLWQKIAESLPLKLRCNTEVLAIRRNSDGVTVDVKSLDEVETLEFDKIIISGPFPLKYGRIYRSLPSTCIECEKEVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHLPVGFYYISEYMEDPSTIGNPVAMQKYYADTNIFLFWSYGNSVDIKGPTVKELAIKAIEAMGDMKDGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALMCKNFANSNDLPLFPYTKSLFPLQTECQNKNPKELGELPEVQFPNLPTLNSYLKYWGTHPITQNRTLYTWINEEGSPVCHRTYGEQHFNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVIPVPVLPPDPMQRSGQALMKIENISKSCGIVAILSTVAYHSAVRAGSLKNFISLTGKKGKSSARWPNLPWFHTDTWVKNSKSMVLENLDDQCEPQPGDLCFLQFTSGSTGDAKGVMISHGGLIHNVKLMRSRYKSISRTVLVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELVIRRLESDKDKLQNLDLSSLIFLMVAAEPVRQKTLKRFIELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRVCCGYFHPEDADVDIRIVDPQTCEELQEDGKEGEIWISSPSAGLGYWGREELSQETFRNELQNHPGRNYTRTGDLGRTIDQKLFITGRIKDLIIVAGRNVYSADVEKTVETSSEFLRPGCCAVVGVPEEILSAKGISIPDGSDQVGLVVIAEVRDGKQVSKDLIENIKTCVAEEHGVSVASVKLVKPRTISKTTSGKIKRFECIKQFTDETLNLVPLGQKPVFTKNSLVRSFTTATCREEKPRQPKLVRSIPAPSKRISKNDIVEFLKGLISEQTGIPINNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCIVELANFSEDLISKAQPQLSSNPSNVLEDEVDSTELVVEVPKSHQFGIRLLQLLALFYISIMLASPAYLSITAFLNFFQSASKSIDGVPWLNYLISLTFAPLAWILCIASTCICISIFGSAFLGLNYALTSEISIYSMDFIKWWALYKTREIASKVLAIHLRGTVFLNYWFEMLGARVGSSVLLDTVDITDPSLVSIGDEAIIAEGVLVQSHEVKNGILSFHPIRIGKYSSIGPYAVIQKGSVIGEGAEVQALQKVGGGHHVLKSAKLNNVDKNAELHVTTSKTQYDIYHFMGIYLVGFLSSLAGAIAYFLYIRFSKQPLSLQQFSFVCICGAFHWIPFTIIAYATMFSDVPSNPITFAISFTSAYLLHGLILIILTSAFTRLLMSNQKQTQFKTWLRYQITSSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELLSIGEGVHLGDFSRIITGFHSSNGYACGKIEVQDNSVIGSQSLILPGSLVQKNVILDERDMECKKKVDNLAAAILPKEDSQKVTLSRTWYQTLSALFIQPLLQTVLPYAIVGLAVFVPLNWIVHLKNAKILPIYWLFPLCWVLSGALAALACVIAKWVLVGRKKAGETVPIWSPRIIMDSTWQAIRTLVGDYFMDMTSGSFLFVLWMKLMGADVDMDDAVYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGEGGMVKFGEIKIGEDGFIGSRAVAMPGVQLENEGNLSALSLAMKEEIIRSR 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi324g00033 1918 SUPERFAMILY Trimeric LpxA-like enzymes 1589 1667 IPR011004 -
Sebi324g00033 1918 ProSitePatterns Phosphopantetheine attachment site. 1132 1147 IPR006162 -
Sebi324g00033 1918 CDD FAAL 488 1051 IPR040097 GO:0008610
Sebi324g00033 1918 ProSitePatterns Putative AMP-binding domain signature. 659 670 IPR020845 -
Sebi324g00033 1918 Gene3D - 303 382 - -
Sebi324g00033 1918 ProSiteProfiles Carrier protein (CP) domain profile. 1103 1177 IPR009081 -
Sebi324g00033 1918 Pfam Flavin containing amine oxidoreductase 192 267 IPR002937 GO:0016491
Sebi324g00033 1918 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
Sebi324g00033 1918 Gene3D - 460 931 IPR042099 -
Sebi324g00033 1918 Pfam AMP-binding enzyme 503 937 IPR000873 -
Sebi324g00033 1918 Pfam Phosphopantetheine attachment site 1108 1172 IPR009081 -
Sebi324g00033 1918 SUPERFAMILY Trimeric LpxA-like enzymes 1766 1909 IPR011004 -
Sebi324g00033 1918 PRINTS Adrenodoxin reductase family signature 23 45 - -
Sebi324g00033 1918 PRINTS Adrenodoxin reductase family signature 47 60 - -
Sebi324g00033 1918 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 1682 - -
Sebi324g00033 1918 SUPERFAMILY FAD/NAD(P)-binding domain 21 274 IPR036188 -
Sebi324g00033 1918 Gene3D Hexapeptide repeat proteins 1323 1427 - -
Sebi324g00033 1918 Gene3D - 94 202 - -
Sebi324g00033 1918 Gene3D - 1095 1175 IPR036736 -
Sebi324g00033 1918 Gene3D - 932 1058 IPR045851 -
Sebi324g00033 1918 Gene3D - 23 424 IPR036188 -
Sebi324g00033 1918 SUPERFAMILY Acetyl-CoA synthetase-like 475 1055 - -
Sebi324g00033 1918 Gene3D Hexapeptide repeat proteins 1550 1671 - -
Sebi324g00033 1918 SUPERFAMILY Trimeric LpxA-like enzymes 1327 1424 IPR011004 -
Sebi324g00033 1918 SUPERFAMILY ACP-like 1101 1180 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi324g00033 Sebi-Chr324 752398 759157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi324g00033 655 1052 Monolignol Biosynthesis Gene Families AT1G20480 27.431 2.52e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi324g00033 - - adu:107477067 2959.86