Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi324g00014 ATGGAAATTAAAAAGAAGGAGAAAGATCAGCAAAGTATATCATCTAACTCTTTGGATGAGGACGAGGCTGTAACGGTGGCTTTACACTTAGGGCTTCCAGCAGCTGATTTAGCTTACTCCTCACAGAAAGAAGAAAAAATGCATATGTGGGGGCATGGATCTCAGTATAGAAAGGGACCAGAGTCTCTAAGGGGAACACAGCCAACAGCTATGCTTAAACTCCCTTGTTTTTGCTGTGCACCTGGATGTAAGAACAACATTGACCATCCAAGAGCAAAACCACTCAAAGACTTCAGAACACTTCAAACACATTACAAGAGAAAGCATGGAACGAAACCTTTCATGTGTAGAAAATGTTGCAAATCATTTGCTGTGAGAGGTGATTGGAGGACTCATGAAAAAAACTGTGGGAAGCTCTGGTATTGTTCTTGTGGGTCTGATTTTAAGCATAAAAGATCACTTAAAGATCATATCAAGGCATTTGGACATGGACATACATGCTATGGAATTGATTGTCTTGATCAATATGATGAAGCAGGCTCTGAAATTGAACAAGAAAATTAA 564 0.3954 MEIKKKEKDQQSISSNSLDEDEAVTVALHLGLPAADLAYSSQKEEKMHMWGHGSQYRKGPESLRGTQPTAMLKLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCCKSFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHGHTCYGIDCLDQYDEAGSEIEQEN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi324g00014 187 Gene3D Classic Zinc Finger 73 165 - -
Sebi324g00014 187 PANTHER ZINC FINGER PROTEIN WIP2 45 185 IPR043584 GO:0003700|GO:0010468
Sebi324g00014 187 SUPERFAMILY beta-beta-alpha zinc fingers 96 134 IPR036236 -
Sebi324g00014 187 FunFam Zinc finger protein WIP2 83 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi324g00014 Sebi-Chr324 260709 262522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi324g00014 3 185 C2H2 Transcription Factor Family AT3G57670 69.399 9.86e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi324g00014 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi324g00014 - - gmx:100789416 315.849