Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi324g00010 ATGCAGGAGAGTTCATACCCTTCAAATTCAGGCTTTTACAAGTTTGGATGGTCTGAACCTGAGAGTAATTCATACTATCGTTACAATCATGGTTATGATGTAAATCATCAGGAACCACTGGTGGATGAATATAGGAGGCCTTCAGAAAATTCATCGACAATCAATGAACAGACAGCAGCTGTAAGCACAGAGTGGGGGGAAGGTGGAAACACTGACACACGAGACAGTTCTATTGAATGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTCATTTTGCAAGACAATATTGATCCTGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAGGCTGTTGGAACTCAAAGCCGTGGTCTCACCCAAGAACAGATCTCCTTGCTTCCAGTGTCAAAGTACAAGTGTGGGTTCTTCTTGAGGAAGAAGTCAAGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGGATCACTTTGCCATGTAAACATGTCTATCATGCCAGTTGTGGGAACAGATGGCTTAGCATCAATAAG 558 0.4229 MQESSYPSNSGFYKFGWSEPESNSYYRYNHGYDVNHQEPLVDEYRRPSENSSTINEQTAAVSTEWGEGGNTDTRDSSIECPRRHHSNSNDYQVILQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISLLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi324g00010 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 186 IPR013083 -
Sebi324g00010 186 SUPERFAMILY RING/U-box 150 185 - -
Sebi324g00010 186 MobiDBLite consensus disorder prediction 48 75 - -
Sebi324g00010 186 Pfam Ring finger domain 150 185 IPR001841 -
Sebi324g00010 186 FunFam E3 ubiquitin ligase BIG BROTHER 113 186 - -
Sebi324g00010 186 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 186 IPR033276 GO:0004842|GO:0016567|GO:0046621
Sebi324g00010 186 MobiDBLite consensus disorder prediction 48 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi324g00010 Sebi-Chr324 152124 154900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi324g00010 9 186 C3H Transcription Factor Family AT3G63530 46.448 3.99e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi324g00010 K19045 - gmx:100793907 359.377