Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi322g00022 ATGTCAATGGAAATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGCAGCAGTTTGCTCACCATAGTGACGGTTCGATGTGGCCATTGTGCCAATTTGCTATCAGTTAACATGGGAGCTTCACTTCAAGCATTTCCCCCTCAAGACCCTCAGGTATTTCAGAAACAGCAGCACCTTATAAGTATTCAAGAACCAAGCAGCAAGGAACTGGGATCATCATCTTCAAAATGCAAAGCATTTGAGCCTGTAGAGCATGAGCAACCAAGGATTCCTCCCATTCGTCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATACAAAGAATTAAGGCAAGCAATCCAGATATTAGCCATAGAGAAGCATTCAGCACAGCAGCCAAAAACTGGGCACATTTTCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAGTAAACAAGCAAAGTTGGACCAGGGGGACGTTGGTACTCATAAGTCTAACGGATTCTACTGA 555 0.4432 MSMEMMATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQVFQKQQHLISIQEPSSKELGSSSSKCKAFEPVEHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDQGDVGTHKSNGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi322g00022 184 MobiDBLite consensus disorder prediction 92 109 - -
Sebi322g00022 184 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
Sebi322g00022 184 SUPERFAMILY HMG-box 102 153 IPR036910 -
Sebi322g00022 184 CDD HMG-box_SF 114 150 - -
Sebi322g00022 184 MobiDBLite consensus disorder prediction 78 115 - -
Sebi322g00022 184 FunFam Axial regulator YABBY 105 175 - -
Sebi322g00022 184 Pfam YABBY protein 7 160 IPR006780 GO:0007275
Sebi322g00022 184 Gene3D High mobility group box domain 98 156 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi322g00022 Sebi-Chr322 503990 511187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi322g00022 1 184 C2C2-YABBY Transcription Factor Family AT1G08465 64.362 5.43e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sebi322g00022 YABBY 2.2e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi322g00022 K25796 - gmx:100785458 301.597