Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi322g00019 ATGATGGATCCCTTGATCCGCAAGCTCCGGCGCCGCCTCCTCGCATGGCTTCACCGATCTCGTTCCCGTTCGGTATTATTTGTGAGGAGACTTTCGTATAAGGATGTTAGAAAGGCAACCGATGGTTTCCACAGAGTCGTTTATAGCAATTCGGAAGTTTGTGCATATGTTGCGAATTTCCGAGAGGGTGGTGGCGTTTGCTTGGTGAAAGAAGTGAAAGATTTTGGTCAAGACAACGACAATTTCCACAGACAAGTGCAATTCTTGGGGCGCTTGCATCATCGCCACCTTCTCTCACTTAAAGGCTTTTCTATGGGACACAATCGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTTAATGACCCATTGAAGACTCCCTTAAATTGGAGGACGAGGTTACAGATAGCTAATGGTGTTGTGGCTGCACTGGAATACTTGTTTCTTTTCAGTGAACCTCCAGTATGCCATGTCTCTATCAGCTCAAGCAATATTATGTTAGATGAGAACTTCACCGCTAAAGTATCTGACTTTGGCCTTCGTAAATCTGGTGGAAATTCTGTCATGATGCCATATTCTGAAGATTGCATGGGGCAGAAAAGTTCCAAGATTATATTCCAACTTGGAGTGCTCATATTGGAACTGGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAATTGAATGGATCCAAGAATCCCGATTTTACAGTTCCATAGATAAGATGATAGACCCTGATCTTGGAAACAGTTATGACTGTACGGAGCTTAAAAGTCTTCTAGGTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATTTACAACTCCTCAGTTATTTCGGTATCTCCAAAAGAAGATTGATATTCCCCATGACTAG 909 0.4257 MMDPLIRKLRRRLLAWLHRSRSRSVLFVRRLSYKDVRKATDGFHRVVYSNSEVCAYVANFREGGGVCLVKEVKDFGQDNDNFHRQVQFLGRLHHRHLLSLKGFSMGHNRKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPVCHVSISSSNIMLDENFTAKVSDFGLRKSGGNSVMMPYSEDCMGQKSSKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYSSIDKMIDPDLGNSYDCTELKSLLGVAKLCIKSWDKPSFTTPQLFRYLQKKIDIPHD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi322g00019 302 ProSiteProfiles Protein kinase domain profile. 33 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi322g00019 302 FunFam Protein kinase superfamily protein 17 116 - -
Sebi322g00019 302 FunFam Protein kinase superfamily protein 118 208 - -
Sebi322g00019 302 PANTHER OS01G0253100 PROTEIN 26 295 - -
Sebi322g00019 302 SUPERFAMILY Protein kinase-like (PK-like) 25 252 IPR011009 -
Sebi322g00019 302 FunFam probable receptor-like protein kinase At1g49730 212 301 - -
Sebi322g00019 302 Pfam Protein tyrosine and serine/threonine kinase 67 191 IPR001245 GO:0004672|GO:0006468
Sebi322g00019 302 Gene3D Phosphorylase Kinase; domain 1 12 116 - -
Sebi322g00019 302 Gene3D Transferase(Phosphotransferase) domain 1 118 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi322g00019 Sebi-Chr322 403945 406671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi322g00019 29 301 Receptor kinase-like Gene Family AT3G19300 36.486 1.52e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Sebi322g00019 PK_Tyr_Ser-Thr 6.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi322g00019 - - gmx:100791979 486.878