Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi322g00016 ATGGGTGTCTCAGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAGAAATCAGAAAAGTCAAAGTTGAAGGATAAAAATAAGTTTGGCAAGTTTCACCATCAAAGAAAGCATTCCAACGAATTCGATAATGGTCCAAACGAATTGGATAATGATGCTAAACCACCTATTGGAGACAACAATGGCCATACAGACCTTGATGCCCATTATTCTTCTACTTCACAACAAGCACATGATGCTGCACATTATCATCAAATTATGAGGGAGGAATGGGCTGCAATACGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCTCTAGCAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACGCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCATGTTCGCATGGCTTTGGAAAAACAAGCAGAAAAACAGAAACATCAGCAACAGCTTCCAAATGAAGCACGAGTTCGAGACATTGAAGAAGGATGGTGTGATAGTGTGGGATCTTCTGAAGAAATTCAGGCTAAAATATTGAAGAGACAAGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGCCAGGACCAAGACAGCAGGCTGTTTCGTCTGGATTTGAACCAGATAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGGTGGATGGTTGTCCGTCCTTGGGAGAATCGCTTCGTTGACATTAGTCTGAGGGATGGAGTAACAGTACGTCAGACTGGAGCTATGGATGATAAAAATGGAAATAGACCTCAGTTAAGATCTGCTAACAAGAAACCATTTTCATCAAACATTCATCCAAACCTTACAAGTCACAGAACTGCTCCCACTCTTTCCGATGGCAGTGATTCTTCACCCAGCAAGTCAGCAGGTTTGCTAGAATCATCAACCACACAGCCTGTTAAGCCAGATTCTAAGGTAAATGTTGAACATCGTGTTGAAGAAGTTAAAGCAAAACCCAGAAATGGGTCAAGATCTTACAGTAATCCAAAGGAGAGAACATCACAGGCAGATAAGCAGGCCAAAAGACGATTATCGCTGCCTAACAGTGGGGGTGGTCCTGGGTCTGAAACAGCCAGACATCTTATTAGAACAAATGTGAAAGGGACACCAAGCATGCAAAGGCCTAACAGGGATAAGCCCAAGTTCAATGGGAGAGGGGATGTGAATCTTACAAAACCAGTTCAACAACCCGGGGACATGTAG 1296 0.4429 MGVSGKWIRALVGLKKSEKSKLKDKNKFGKFHHQRKHSNEFDNGPNELDNDAKPPIGDNNGHTDLDAHYSSTSQQAHDAAHYHQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALARGHAVRKQAAITLRCMQALVRVQARVRARHVRMALEKQAEKQKHQQQLPNEARVRDIEEGWCDSVGSSEEIQAKILKRQEAAAKRERAMAYALAHQWQPGPRQQAVSSGFEPDKSSWGWNWLERWMVVRPWENRFVDISLRDGVTVRQTGAMDDKNGNRPQLRSANKKPFSSNIHPNLTSHRTAPTLSDGSDSSPSKSAGLLESSTTQPVKPDSKVNVEHRVEEVKAKPRNGSRSYSNPKERTSQADKQAKRRLSLPNSGGGPGSETARHLIRTNVKGTPSMQRPNRDKPKFNGRGDVNLTKPVQQPGDM 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi322g00016 431 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Sebi322g00016 431 MobiDBLite consensus disorder prediction 23 76 - -
Sebi322g00016 431 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Sebi322g00016 431 SMART iq_5 87 109 IPR000048 GO:0005515
Sebi322g00016 431 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Sebi322g00016 431 MobiDBLite consensus disorder prediction 335 351 - -
Sebi322g00016 431 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Sebi322g00016 431 Gene3D - 88 130 - -
Sebi322g00016 431 FunFam IQ-domain 11 87 138 - -
Sebi322g00016 431 MobiDBLite consensus disorder prediction 270 431 - -
Sebi322g00016 431 ProSiteProfiles IQ motif profile. 137 165 IPR000048 GO:0005515
Sebi322g00016 431 MobiDBLite consensus disorder prediction 283 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi322g00016 Sebi-Chr322 340033 345244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi322g00016 1 416 IQD Protein Family AT3G22190 50.926 6.74e-118 349