Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi321g00025 ATGTTAGCTAGGCACTCCATTATTGCAGAGACTTCTTCTTCTACTGCTACAATTACCATCACTTCATTCTCATCTGGATCTGCCACTACTCCATCTTCTGCTGTTACAACTATCGTTCCCTCTACAGAGGCATCCTCATCTTTTCTGCCTTCAATTACTTCATCGCCTTCTTCGGTAATTTCATCGCCTTCTTCAATTACCTCTGCCTTTGATCTGTTCTTTACCTTCCAAGATTGTGTAACAAAATTGGAGTGGAAACCGTCACTGGATTCGTTCCATTTTGGAAGCTTTGGATTGCAATCTCCATTTGGTGTTTCAAAGCTCTCTGGATGTGAAGAAGACAAGGAAGTTGAACATTATGTCTCTACTTCTGCTCCAATTTTTATCGGTGAAATCAAGGCCAAGCTTGGAGATTATGTAGCTTCTGAGGCGTTCGGATTCGGCGACAACCTCTTGCCCCGTTGCGTTTTCTCTAAACTCTTTCTTCAAAACGTAGACCTAATGGCTCTCTTAGACTCTTCTTCTCCTCGCCGCAACATTTCGATCCCTGTTTTTGGAGTGTCTCGATTTCTGAAATTAGAGAAGTCTCCTTCCTTCCGATGGTTGCTTCAGTTTTCTGGAACCAAGGAATGTCTTCTCACCGATAATCCCTTCCTTGTCAAGGTCGCTATGGAGTGCGGTGTTGGAACCTTCACCAAAACTGCAGCTGAGGATGATCGCAAGAGAGAAAACCTCTTCAAGGAGCTATGGATTGTGTTCACTGAAGTGGTTATGGCGAAGGAAGAGGAGAACGCAATATCGTTCAAATTCGAATTCCCGAGGGATGCATTGCTGGACTCAGGTTGGTTGCATTCTTGGCAAAATCATGATGTTTTTGAAATTAGTATTTCTATGGATGGACAGACTCGTGTGCATGCTTTGGTTGCTTTCATGATTTGTTTTTGTAATAAGATGGATGTCATAACTCCAAAGGTTAGAAAGGTTATTAGTATTGAGAGGGATGCACACTTTCTGTTTGATGAAATGGCTACATGGAAGATTTCTCCTGCTCTGGCTGCTGGTTCTGCTGCAATATTGAAGCTATTTGAGTTAGCATATGTGACCTGTTTGGAGCGTGTTGTATCGTATGAAACTTCCATTAAAGATTCTTTTTCTAGTATACTTGAAATTGCTTCTAACAATGTTTTTGAAGATTTCAAGCTAACTATAGACAGGGATGGTTCTCTAATAAATGAAGTTGACCTCTGGTATGTCCGCCAAAATGTATCTAAACAAATTGTTCTGGAGCATAGAACTCCTTTAATGGTTGCTGCTACCTATGGGAGTATTGATTTTTTAAAGCTTATACTCTTATGTCCAGAGGCTGATGTAAATTTCTCTTATGGGACTGATAAAAGCATTGCCCTTCATTGTACTGCTTCAAGTGGTGTAGTTAATGCAGTTGATATTGTGAAACTGCTTTTATCACCTGGCGCTGATATCAGTTGTGTCGATGCTAATGGAAATCTTCCTCTTGATGTTATTGTTGTTCCTCCAAAGCTCCAAGGTATGAAAACAATGCTTGAAGAATTTCTCTCATATTGTGTTTTTGATGGGTCTGTTAATGACTGCTCCCATCCAGTTTCGGCTAATTCATCCAGTCCTGGTTTAGCTGCTATTTTATCATCACTTGATAATGGGTTGCCATCCTCTCCTGTGGCCCCAAAGTGTACTGACACAGCTTTCAATTCTGCATCAGACAAGAAAGAATATCCAATTGATCACATTGACACTTGCAGTGAGGATGGATTTCTGAATTTGCTTACTGATGGCTATGATTACCATGGAGGAGGCAATGTCTTTTGCATCCTAGCATGA 1857 0.4093 MLARHSIIAETSSSTATITITSFSSGSATTPSSAVTTIVPSTEASSSFLPSITSSPSSVISSPSSITSAFDLFFTFQDCVTKLEWKPSLDSFHFGSFGLQSPFGVSKLSGCEEDKEVEHYVSTSAPIFIGEIKAKLGDYVASEAFGFGDNLLPRCVFSKLFLQNVDLMALLDSSSPRRNISIPVFGVSRFLKLEKSPSFRWLLQFSGTKECLLTDNPFLVKVAMECGVGTFTKTAAEDDRKRENLFKELWIVFTEVVMAKEEENAISFKFEFPRDALLDSGWLHSWQNHDVFEISISMDGQTRVHALVAFMICFCNKMDVITPKVRKVISIERDAHFLFDEMATWKISPALAAGSAAILKLFELAYVTCLERVVSYETSIKDSFSSILEIASNNVFEDFKLTIDRDGSLINEVDLWYVRQNVSKQIVLEHRTPLMVAATYGSIDFLKLILLCPEADVNFSYGTDKSIALHCTASSGVVNAVDIVKLLLSPGADISCVDANGNLPLDVIVVPPKLQGMKTMLEEFLSYCVFDGSVNDCSHPVSANSSSPGLAAILSSLDNGLPSSPVAPKCTDTAFNSASDKKEYPIDHIDTCSEDGFLNLLTDGYDYHGGGNVFCILA 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi321g00025 618 SUPERFAMILY Ankyrin repeat 383 509 IPR036770 -
Sebi321g00025 618 Gene3D - 359 521 IPR036770 -
Sebi321g00025 618 ProSiteProfiles Ankyrin repeat profile. 464 499 IPR002110 GO:0005515
Sebi321g00025 618 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 187 259 - -
Sebi321g00025 618 Pfam Ankyrin repeats (3 copies) 421 496 IPR002110 GO:0005515
Sebi321g00025 618 Pfam Protein RETICULATA-related 212 259 IPR021825 -
Sebi321g00025 618 SMART ANK_2a 429 459 IPR002110 GO:0005515
Sebi321g00025 618 SMART ANK_2a 464 496 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi321g00025 Sebi-Chr321 538840 541195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi321g00025 383 587 C2H2 Transcription Factor Family AT5G12850 48.585 7.21e-44 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi321g00025 - - gmx:100792574 287.73