Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi321g00014 ATGTCAAATTTTTTTACCTCTTGCAAGCTCTTGTGGGACGGGATCATGGGAATAGCCCCTGAGATAATTCTTACTTGTATTGTTGATGTTGATTCCATTAAAAAGAAGGTCCTCTTGGCTCTTGTCCACACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGTCTGGTTGTACATTGGTTTGCCCAGCATGTGTGGTTGTGTTGTGGGTATGGAACATGCATTCGAAGAAGAGACATATTCTGATTATGTTGAAGAGGAAGACACAGAGTGTAGTGCTGAAGGGTCAGAAAATGGTGAAGATGACAGCAATAGTTCTGAAGAAGATGCAGATTATACAGATGCAAGTGAGGAGGACAATGGCCTGCATGAAAAACCATGTGCGGAGGACAATTCCATCCATGAGAGGGTTGCTCATGTTGATGAAAGTAATGAGGTAGCTGTTGACGATGAGGAGGATATGGGGAATATTGAATTCAAGACATTAACATTGAATGATCTTATGTCTTTTCACTTTCCGAACCTTGAAGTGGCATTTATCTTTTATCGTTGGTTTGCAAGATTCAAAGGTTTTGCAGCTCGGAAGGACCGGACAGTGAAAAACAAGCAGAAGGAAGTGATACAACAAACATTTGTTTGTTATAGGGAAAGTGGAAAGACACGAAAGCATAGTGTTCTGAAACGCCCCCCACGCAAGAGTATTCGTTGTGGATGCCAAGCCAATTGTCAGGTAGGGATAACAACGCCACACATATATGGGTCATTTGCAAGTGATATGGGAGGGTTTGAAAACATCGGATTCAGGAAAAAAGATAAGTATAATGAGATTGAAAGGCAACGACGAAAGAAAGGATTAGATGCAAGAAGTGCAGTGGCTTATTTGCAACAATTGAGAAGGTCTGACGACGCGATGTATTGGAGACACACAACTGATAATGAGGGGAGGCTTAAGAACCTTTTTTGGTGTGATGGTCACTGTCAGAAGGACTATTTACTTTTTGGGGATGTGCTTGCTTTTGATGCAACGTACAAGAAGAACAAATACAGTTGTCCGATGGTTGTCTTCTTTGGGGTAAATCATCATAACCAAACCATTGTTTTTGGTACTGCAGTGGTTTCCAACGAGACAGAGGAAACATATGTTTGGGTTATGGAACAGTTACTGCATGCTATGAAAGGGAAGATGCCTATATCATTCATAACCGATGGGGACCATGCCATGAGGAATGCCATCAGAAGAGTATTTCCCATGGCCCATCACAGGTTATGTGCTTGGCATCTAATTCGAAATGCTACAACCAATGTGAAGAACCCTCGATTCACTTCTCTATTTGAAGACTGCATGTTGCGTGATCATGAGATTTCAGAATTTGAGAGTAAGTGGGGGGACATGGTCAATGCTTGTGGGGTTCAGGATAACATGTGGGTTAGACAATTGTATGAAAAGAAGATGATGTGGGCCACTTCTTACATAAGGGGGAATTTCTTTGCTGGATTTAGGACTACATCTCGTGTAGATGGGTTACATGCATTGCTAGGGAAATTTGTTAATAGCCGGCATAATTTGACTGAGTTCTTAGAGCATCATCAGCGTTGCCTTTTGCAAATGCGATTTAGAGAAGTGGAATCGGATTTTGATTCAATACATGGGGAGCAGGAGTTGCAGACTCAATTAAGGAGCTTAGAAATGGCTGCTGCAAAGGTCTACACTAAAGAAATACTTTTCATGTTCAGGCAGGTGGTCCAAAGTGCTAGTAGGGTGAGGGTCACAGGTGAAAAACGTATTGGAAGTGGGTTCATTTACTTTGTATCCAAATACCGGAGGGCGGACAAAGAGTGGCATGTCACCTTTTGGCCCTCAAATATTGAATTCAAGTGTTCTTGTCAGAGAATGGAGTCTTTAGGTATCCCTTGTGATCACATTGTTGGTGTAATGGATTTTTTAAACATGGTTGGAATCCCGCAGTCACTTATACTAAATAGGTGGACAATTTGTGCAAAGGAATCACTTGATCAGGGAGCATCAGGCGGGTGGGATCCTTTGATGGTGTGTCGGTATGATGCACTTCGAATGTCATCCAAACGTTTGATGAAAGTTGCATGCAGGACTAGTAAGGATTTTTCTGAAGTAATGACTATCTTTAAAAATGAAAGTGAGACTTGGGAGGCCAATCAGCGGAGGCCTAGTTGCAATGTTCGCAATGAGGAAGATGTGATTACAGAAAATATTAGGAACCCTACTGTTGTAAGGACGAAGGGTTGCAGAGGTGGTAGCTCTATAGGAAATTGTCCAGGTATGAGGACCTTACATTGTAGTGCATGTGGCCTTGTTGGTCACAACAAGCAAACTTGTTTAAGGAGAAGGACGGTGGACGAAGAAGGCATGGCCATAGGAGGAGCTGCTATTGACTGGTAA 2415 0.4232 MSNFFTSCKLLWDGIMGIAPEIILTCIVDVDSIKKKVLLALVHTGACIASLLGQVWLYIGLPSMCGCVVGMEHAFEEETYSDYVEEEDTECSAEGSENGEDDSNSSEEDADYTDASEEDNGLHEKPCAEDNSIHERVAHVDESNEVAVDDEEDMGNIEFKTLTLNDLMSFHFPNLEVAFIFYRWFARFKGFAARKDRTVKNKQKEVIQQTFVCYRESGKTRKHSVLKRPPRKSIRCGCQANCQVGITTPHIYGSFASDMGGFENIGFRKKDKYNEIERQRRKKGLDARSAVAYLQQLRRSDDAMYWRHTTDNEGRLKNLFWCDGHCQKDYLLFGDVLAFDATYKKNKYSCPMVVFFGVNHHNQTIVFGTAVVSNETEETYVWVMEQLLHAMKGKMPISFITDGDHAMRNAIRRVFPMAHHRLCAWHLIRNATTNVKNPRFTSLFEDCMLRDHEISEFESKWGDMVNACGVQDNMWVRQLYEKKMMWATSYIRGNFFAGFRTTSRVDGLHALLGKFVNSRHNLTEFLEHHQRCLLQMRFREVESDFDSIHGEQELQTQLRSLEMAAAKVYTKEILFMFRQVVQSASRVRVTGEKRIGSGFIYFVSKYRRADKEWHVTFWPSNIEFKCSCQRMESLGIPCDHIVGVMDFLNMVGIPQSLILNRWTICAKESLDQGASGGWDPLMVCRYDALRMSSKRLMKVACRTSKDFSEVMTIFKNESETWEANQRRPSCNVRNEEDVITENIRNPTVVRTKGCRGGSSIGNCPGMRTLHCSACGLVGHNKQTCLRRRTVDEEGMAIGGAAIDW 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi321g00014 804 SMART 26again6 624 651 IPR006564 GO:0008270
Sebi321g00014 804 Pfam FAR1 DNA-binding domain 181 244 IPR004330 -
Sebi321g00014 804 ProSiteProfiles Zinc finger SWIM-type profile. 601 649 IPR007527 GO:0008270
Sebi321g00014 804 MobiDBLite consensus disorder prediction 80 128 - -
Sebi321g00014 804 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 155 714 IPR031052 GO:0006355
Sebi321g00014 804 Pfam MULE transposase domain 336 430 IPR018289 -
Sebi321g00014 804 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi321g00014 Sebi-Chr321 134373 139515 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi321g00014 MULE 4.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi321g00014 - - tpra:123905832 692.189