Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi321g00010 ATGGGATTGAAGAAATGTGGTAAACACATTTTGTTTTGCAACAAGTGGGAAGAGTTTGTGGAATACTATTCTATCAGTTATGGTTGCCACCTAGTTTTCAAATATAAAGGGAATTCAAAGTTTAATGTTCTCATATTTGATGCAACTTCTGTTGAGATTTACTATCCATGCAAAAACAATCACCCAAAGTTTCCTAGGATAAGGGCCAGGTATGTTCCTGTTGAATTTGCTCAAAAGTATCTCAAGCCAAAGGTTCCTATAAAGCTTCAAACTTCTAGTAGAGAGCAGTGGGATGTTTCTTGCGTAAAACATTGTGACAAGGCAATCATAATGGCAAAGGGAATCCCTAAATTTGCTAGAGAAAACAAACTCTCAGAAGGAGATTCCTTTGTGTTTGAGTTGATCAAGAGGGAGCCACTTGTCCTGAAAGTTACACCGTTTTCATGCAATTGA 453 0.3731 MGLKKCGKHILFCNKWEEFVEYYSISYGCHLVFKYKGNSKFNVLIFDATSVEIYYPCKNNHPKFPRIRARYVPVEFAQKYLKPKVPIKLQTSSREQWDVSCVKHCDKAIIMAKGIPKFARENKLSEGDSFVFELIKREPLVLKVTPFSCN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi321g00010 150 PANTHER B3 DOMAIN-CONTAINING 2 137 - -
Sebi321g00010 150 SUPERFAMILY DNA-binding pseudobarrel domain 4 56 IPR015300 -
Sebi321g00010 150 Gene3D - 58 150 IPR015300 -
Sebi321g00010 150 Gene3D - 1 50 IPR015300 -
Sebi321g00010 150 SMART B3_2 64 150 IPR003340 GO:0003677
Sebi321g00010 150 CDD B3_DNA 71 148 IPR003340 GO:0003677
Sebi321g00010 150 ProSiteProfiles B3 DNA-binding domain profile. 1 49 IPR003340 GO:0003677
Sebi321g00010 150 Pfam B3 DNA binding domain 70 144 IPR003340 GO:0003677
Sebi321g00010 150 SUPERFAMILY DNA-binding pseudobarrel domain 61 147 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi321g00010 Sebi-Chr321 105869 106580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi321g00010 3 61 B3 DNA Binding Superfamily AT4G01580 45.763 7.54e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi321g00010 B3 1.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi321g00010 - - tpra:123915429 155.606