Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi320g00091 ATGGCCAATCCCAATGTTCTCCCTGCAACGCTTGATTATAGAAAAGGGACGTGTATCCCACCAGCTGATTGTCACACCACCAATAACCCACTCCCATCTACTAACACTCTCAGTTATCTTTCTCGCTATAATCAAATTATCAATGAAAAAGCTCAACCTGTCCAACTCATACCCTTATCACCAACTAACAGAGCCAGACCTCAAGAGAAAAATAAATCAAAGGAATCAGTGATGCAGCAACTTCAACATCTCCTCCTATCACCCCCTCCTCATCTCAACCACGTTGGGGAAGGAGATGGCACCTCCAATCCTACCGGGCAGAGCGCCACTGACATGCTGGGGAGACTGACAGACGCCCAACCTAGAGGACCTAAACCGCAAACAGTTTTACCCAATTACAGCTACTCAACTATTAGCTCCTGGGCGTCAGGGGAGGATCTCCCTGGGGAGGGATGCCCACCAAGTGAGATTTTAAATGGCTTCAGGGGAATTCGAACCCATGTCCATGAGGAGACAAAGGGACAAGAAGGACCTACTATTACAAATATCCCTTCAGCTTCAACTTTGCGAAACATGAAGAATGAGATTGGGCGGAAAGGAAAGAATCACCAACGTGGAAGTGGTGAGAAGAAGGATGGAAATTATGATGGTCGAATTCACAGCATTCGATATGAGAAGAATGGACCATACACATGCTCAGAGTGCTACCAACAGTTCCCTACCTCACAAAAATTTGCGGCTCATGTGAATGGTAGTCACTACAAGCATGAAACAAAAACTCAGAAAAGGAAGAGACTTTTGGCCAGAAACCAACGCAGAAATCATCTCCGCCTTCAAAAGGTAAATGGTGAGATCACTTTTGTTCCTGTTTCTAATTCTGAGCTCAAGGTTGGAGAAGAACGTGCTGCTACTGTTATGAGAGTCAAAGTTGAAGCTGGTGATGATGGCGATCATCAGGTTGCGCTTCCTGCAACAAAGGAAACTCTTGGAAAAGGCATCAAATTGGAGCGTGCTGATGATGCATAA 1026 0.4552 MANPNVLPATLDYRKGTCIPPADCHTTNNPLPSTNTLSYLSRYNQIINEKAQPVQLIPLSPTNRARPQEKNKSKESVMQQLQHLLLSPPPHLNHVGEGDGTSNPTGQSATDMLGRLTDAQPRGPKPQTVLPNYSYSTISSWASGEDLPGEGCPPSEILNGFRGIRTHVHEETKGQEGPTITNIPSASTLRNMKNEIGRKGKNHQRGSGEKKDGNYDGRIHSIRYEKNGPYTCSECYQQFPTSQKFAAHVNGSHYKHETKTQKRKRLLARNQRRNHLRLQKVNGEITFVPVSNSELKVGEERAATVMRVKVEAGDDGDHQVALPATKETLGKGIKLERADDA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi320g00091 341 ProSitePatterns Zinc finger C2H2 type domain signature. 232 253 IPR013087 -
Sebi320g00091 341 ProSiteProfiles Zinc finger C2H2 type domain profile. 230 258 IPR013087 -
Sebi320g00091 341 MobiDBLite consensus disorder prediction 197 216 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi320g00091 83 285 C2H2 Transcription Factor Family AT2G18490 30.876 1.20e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sebi320g00091 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi320g00091 - - aprc:113873287 116.701