Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi320g00083 ATGGCGGTCCTCGGCGCCAGCGGTTCTGGAAAATCAACTCTGATCGACGCGCTGGCGAACCGAATCGCAAAAGGAAGGCTAAAAGGAACAGTGGCGTTGAACGGAGAAGCCTTAGAGTCACGGCTGCTGAAGGTGATTTCTGCATACGTGATGCAAGACGACCTCCTCTTCCCAATGCTCACCGTGGAAGAGACTCTGAACTTCGCCGCTGAGTTCCGATTGCCTCGCACGCTCTCCAAATCAAAGAAAAAGGCTCGCGTCCAAGCTCTAATCGACCAGCTAGGGCTCCGCAACGCCGCGAAAACCGTCATCGGAGACGAAGGCCACCGCGGAGTCTCCGGCGGTGAACGCCGGAGAGTGTCGATCGGCATCGACATAATCCACGACCCGATCCTGTTATTCCTGGACGAGCCAACCTCTGGTCTTGACTCTACAAGCGCGTTCATGGTGGTGAAGGTGCTTCAGAGAATCGCACAGAGTGGAAGCATCGTGATCATGTCCGTTCACCAGCCAAGTTACCGAATCCTAGGCCTTCTGGACCGCATGATCTTCTTATCACGCGGTCAAACGGTTTATAGCGGTTCTCCGATGCAGTTACCGTTGTTCTTCGCCGAGTTCGGTCACCCGATACCAGAGAGTGATAACCGGACAGAGTTCGCGTTGGACCTGATTCGCGAGCTTGAAGGTTCGCCAGGCGGAACAAAAAGCTTGGTGGAGTTCAACAAGTCATGGCAGAGCATGACGAAACTTCACCCTGTGGATGCTTCTGAACAACGAAACGGCATGTCGTTGAAGGAAGCAATTAGCGCGAGCATTTCGAGAGGGAAATTGGTGTCTGGCGCAACAAACACCAATACGAACCCGTCGTCTATGGTGCCGACGTTTGCGAATCCGTTTTGGATTGAGATGGCGACGCTGTCGAAACGTTCGTTCACGAATTCAAGGAGAATGCCAGAGTTATTTGGAATAAGGTTGGGTGCGGTTATGGTCACTGGGTTCATTCTTGCTACAATGTTTTGGCAATTGGATAACTCACCCAAAGGAGTGCAAGAGAGGCTTGGATTTTTCGCATTTGCAATGTCCACAACGTTCTATACCACTGCGGATGCACTCCCTGTGTTCCTCCAAGAACGTTACATTTTCATGAGAGAAACTGCTTACAACGCTTATCGAAGATCCTCATATCTCGTTTCACATGCTCTTGTTGCGTTGCCTTCTCTGGTGTTCCTCTCGCTGGCTTTCGCTGCGACGACGTTTTGGGCTGTGGGGCTTGACGGTGGAGTCTCTGGGTTCTTGTTTTACTTCCTAATTATCTTTGCTTCCTTTTGGGCTGGGAACTCCTTTGTGACGTTCCTTTCTGGTGTTGTGCCTCATGTGATGTTGGGTTACACTATTGTGGTTGCTATTCTTGCTTATTTCTTGCTGTTCAGTGGGTTCTTTATCAACAGAGATAGGATCCCCAGTTATTGGATTTGGTTCCATTACTTGTCGTTGGTTAAGTATCCTTATGAAGCTGTTCTGCAGAACGAGTTTGATGACCCAGTGAAGTGCTTTGTGAGAGGGGTGCAGATTTTCGACAATACCCCTCTTGGTTCCGTGCCTGGTGCCCTCAAGTTGAAGCTGTTGGAGAGCATGAGCAACACTCTGGGAATGAACATTACGAGCTCCACGTGTTTGACAACGGGTTCTGATATATTGCAACAGAATGGGGTGACGGATTTGAGCAAATGGAACTGTTTGTGGATCACTGTGGCTTGGGGTTTCTTCTTCAGGTTTCTCTTCTACTTGTCTTTGTTGGTGGGCAGCAAGAACAAAAGGAGGTGA 1824 0.4995 MAVLGASGSGKSTLIDALANRIAKGRLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLNFAAEFRLPRTLSKSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRMIFLSRGQTVYSGSPMQLPLFFAEFGHPIPESDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKLHPVDASEQRNGMSLKEAISASISRGKLVSGATNTNTNPSSMVPTFANPFWIEMATLSKRSFTNSRRMPELFGIRLGAVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLVSHALVALPSLVFLSLAFAATTFWAVGLDGGVSGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGSVPGALKLKLLESMSNTLGMNITSSTCLTTGSDILQQNGVTDLSKWNCLWITVAWGFFFRFLFYLSLLVGSKNKRR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi320g00083 607 Pfam ABC-2 type transporter 169 246 IPR043926 GO:0140359
Sebi320g00083 607 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 212 IPR003439 GO:0005524
Sebi320g00083 607 Gene3D - 1 201 IPR027417 -
Sebi320g00083 607 FunFam ABC transporter G family member 6 1 203 - -
Sebi320g00083 607 Pfam ABC-2 type transporter 305 511 IPR013525 GO:0016020|GO:0140359
Sebi320g00083 607 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 595 - -
Sebi320g00083 607 Pfam ABC transporter 2 140 IPR003439 GO:0005524
Sebi320g00083 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 199 IPR027417 -
Sebi320g00083 607 ProSitePatterns ABC transporters family signature. 112 126 IPR017871 GO:0005524|GO:0016887
Sebi320g00083 607 SMART AAA_5 1 189 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi320g00083 Sebi-Chr320 915037 916860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi320g00083 1 172 Calmodulin-binding Proteins AT2G36910 29.714 7.79e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi320g00083 K05681 - gmx:100803658 1101.27