Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi320g00081 ATGCTGTCTCCAAAGAGCGTCGCATGGGAGCATCCTTGCTTCGACTTCATTTCCATGACTGCTTTGTTCAAGCAAGGATGTGATGCATCAGTGTTGTTAGATGACACAGATACTTTCACTGGTGAGAAGACTTCTTTTCCCAATGCTAATTCCCTTAGGGGTTTTGATGTGATAGACAACATCAAATCTAAAATGGAGAACATGTGCCCTGGAGTTGTCTCTTGTGCTGACATCTTAGCCCTTGCTGCCAGAGACTCTGTTGCTGCTCTTGGTGGACAAAGGTGGGAAGTGCAATTAGGCAGAAGAGATTCAACCACAGCAAGTTTAGCTGATTCTAATACTGACTTACCTGCTCCTTTTTTGGATCTTAATGGCCTTATCTCTGCTTTTGAGAAGAAAAATTTCACAGCCAAAGAAATGGTTACTTTATCAGGAGCTCACACAGTAGGCCTAGTGAGGTGCAGTTTATTCAGAGCAAGGATATATAATGAGACGAACATAGATCCTTCATTTGCAGCATCAATGCAACAAAATTGTCCCTTTGAAGGTGGTGATAACAATTTTTCTCCTTTTGATTCGACCACCCCATTTGTTTTTGACAATGCTTACTACCAGAACTTGGTGAGAAAGAGGGGTCTGATACACTCAGACCAACAACTGTTTGTGAATGGATCAGGACCCACAGACTCACAAGTGAGTACATATAGCAGAAACATGGGACGTTTCAAAAAAGACTTTGCAGATGCAATGTTCAAGATGAGCTTGCTTACACCACTCACTGGCTCTGATGGTCAGATCAGGACAAACTGCAGGGTCGTCAATTAA 825 0.4255 MLSPKSVAWEHPCFDFISMTALFKQGCDASVLLDDTDTFTGEKTSFPNANSLRGFDVIDNIKSKMENMCPGVVSCADILALAARDSVAALGGQRWEVQLGRRDSTTASLADSNTDLPAPFLDLNGLISAFEKKNFTAKEMVTLSGAHTVGLVRCSLFRARIYNETNIDPSFAASMQQNCPFEGGDNNFSPFDSTTPFVFDNAYYQNLVRKRGLIHSDQQLFVNGSGPTDSQVSTYSRNMGRFKKDFADAMFKMSLLTPLTGSDGQIRTNCRVVN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi320g00081 274 PRINTS Haem peroxidase superfamily signature 91 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Haem peroxidase superfamily signature 73 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Haem peroxidase superfamily signature 139 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PANTHER PEROXIDASE 72-RELATED 22 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 SUPERFAMILY Heme-dependent peroxidases 25 274 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 Gene3D - 23 271 - -
Sebi320g00081 274 CDD secretory_peroxidase 23 273 IPR033905 GO:0004601|GO:0042744
Sebi320g00081 274 ProSiteProfiles Plant heme peroxidase family profile. 23 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 ProSitePatterns Peroxidases proximal heme-ligand signature. 139 149 IPR019793 -
Sebi320g00081 274 Gene3D Peroxidase, domain 2 117 253 - -
Sebi320g00081 274 FunFam Peroxidase 117 253 - -
Sebi320g00081 274 Pfam Peroxidase 20 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 91 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 248 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 72 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 206 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 138 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 53 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 190 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi320g00081 274 PRINTS Plant peroxidase signature 13 33 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi320g00081 Sebi-Chr320 880391 881644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi320g00081 23 274 Peroxidase AT5G05340 57.480 3.85e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi320g00081 K00430 - gmx:100802244 414.846