Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi320g00034 ATGGAAGAGATAGGTTCGGGGACAGCAATAAACCCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGAACTGGTCTTGGGATCTCTGAGCAGGGTAGGTTAGAACCCGTGGAAACTCATGTGAAGAATAACAAACGAGGTTTGGGAGCGGATCAAGTGAAGAAAAAGGCCGTGAAGCCTGATCATAGTGATGCTTCTAAAGGGAACAAAAAGCAGGCAGTGCTAGTTGTCCAAGTTATTTGA 258 0.4457 MEEIGSGTAINPSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADQVKKKAVKPDHSDASKGNKKQAVLVVQVI 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi320g00034 85 ProSiteProfiles G-patch domain profile. 12 58 IPR000467 GO:0003676
Sebi320g00034 85 Pfam G-patch domain 13 55 IPR000467 GO:0003676
Sebi320g00034 85 PANTHER BAT4 PROTEIN-RELATED 6 75 IPR039146 -
Sebi320g00034 85 MobiDBLite consensus disorder prediction 46 75 - -
Sebi320g00034 85 SMART G-patch_5 10 56 IPR000467 GO:0003676
Sebi320g00034 85 MobiDBLite consensus disorder prediction 46 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi320g00034 Sebi-Chr320 401033 401988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi320g00034 1 54 C2H2 Transcription Factor Family AT5G26610 44.444 2.18e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi320g00034 - - cam:101497292 130.954