Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi320g00011 ATGTCTCAGACATCCAGTGTCCCGCCTGTGTTCCAGTCTATCAAATCATTGCCTCCTGAGTTCAAGTTTACTAATAATCCAAACCCTGGTCTTGTGGCAAAACATGGAAATATTAAACTGAGAAGCACTGATCTGATTGGATCAAACGGTCTTGAAAATGGTGCACTAGGAGGGTTGGTTTCTAAGGAAGTTCACAGCCGTGGTGGTGACATGGATCTTTTTGATGAGGAATCGCCATATGGCGGAAAACGCAGATCATTTGATGACAGGCCAACAAATGCTGATGAAGACTCGGTTTCTGATTCGTTGCCCCTCCCATCAATTTCAACATCCTCTAGGGAAAGCAGATGGAGTGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGCTTCAACTTTCTAATGGGGACTGGGAGCTGGTGAAGATAATATCCACTTCTGGAACAGAGTCTATCATTTCACTGCCTGATGGGAAAGTTTTAAAGGTGAAAGATGAAAATTTGGTGCCGGCAAATCCCGATATTCTTGATGGAGTGGATGATCTCATGCAACTTAGTTATTTAAATGAACCGTCAGTTTTATACAACCTGCAATATAGATACAATCAAAATATGATCTATACAAAAGCAGGGCCTGTTTTGGTTGCCGTAAATCCCTTTAAGAAAGTTCCTCTTTATAGTAATGACTATATTGAAGCCTACAAACGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCAGAGAAATGATACGGGATGAAGTTAATCAATCAATAATTATAAGCGGTGAGAGTGGAGCAGGGAAGACCGAGACAGCAAAAATAGCAATGCAGTACTTGGCCGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATATTAAAGACTAATCCAATACTTGAAGCCTTTGGTAATGGCAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGCGAAACTGGAAAAATATCTGGTGCAAATATTCAAACATCTTGTCATACATATGAACTTTTTCATACTGTTGCCACTTTCCAGGAAGCTCTGGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGATCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAGGGGCTGTTCAGCGCTGCCAAGTTGATTGGTTGTGACATAGAAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATATCATTGTGCAGAAGTTGACACTGTCTCAGGCTATTGATGCGAGAGATGCTTTGGCGAAGTCAATATATGCATGTCTGTTTGATTGGCTGGTTGAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACTGGCAGATCTATCAGTATTCTGGATATTTATGGCTTTGAGTCGTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTACAGCAACACTTTAACCGTCATTTATTCAAGTTAGAACAAGAGGAGTATATCCAAGACGGCATTGATTGGACTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGCTGCTATCTCTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGACAAAGCCTTTACTGTGTGTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCCTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCTTCAAGCAAATGTCATCTTCCTCAGATATTTGCATCCCATATGCTTACTCAGTCTGAGAAGCATGTAGTTGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTAGCCACAAAATTCAAGGGACAATTGTTTCAACTGATGCAACGTTTAGAAAATACCACACCACATTTTATTCGCTGCATTAAGCCCAATAACCTCCAATCACCTGGATCATACGAGCAAGGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGGGGTTACCAAGCTCGTCGTCATCGCAGGGAGCTCTGGAGAGGAATCACTACTCTTCAGTCATATATTAGAGGTGAGAAAAACAGAAAGGAATATGCAGCTGTGCTTCAGAGACATAGAGCTGCTGTTATTATACAGAAGTGGATGAAAACAGTATTTGCAAGAAACAGATTGAAGAATATCAATGACGCTGCAGTTGTTATACAATCATTTATTCGCGGTTGGTTAGTCAGAAGATGCTCAGGAGATATAGGATTGTTAAAATCCGGAGGCATGAAGACTAATGAGTCAGATGAGGTTCTGGTGAAGTCGTCTTTCCTAGCTGAATTACAGCGCAGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCACCAACGTCTTCAACAGTATGAGAGCAGATGGTCTGAATATGAATTAAAGATGAAATCTATGGAAGAAGTATGGCAAAAACAAATGAGATCTCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAAAGAAATTCAGATGCATCTGTTAATGCAAGTGATGAGAGGGATTACAGCTGGGATGTAGGAAGTAATCACAGGCGCCAAGAAAGCAATGGAACAAGATCTATGAGTGCTGGTTTGAGTGTTATAAGTAGGTTGGCTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGGACCCAGACCGAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGCGCAAGACTGCGTGAAACAAAGGTTATTTTACATAAACTTGGAAGTGATGGTTCAATTGAGAAAGCGAAGAAAAAGTGGTGGGGAAGAAGAAATAGTACAAGGATAAATTGA 3165 0.4057 MSQTSSVPPVFQSIKSLPPEFKFTNNPNPGLVAKHGNIKLRSTDLIGSNGLENGALGGLVSKEVHSRGGDMDLFDEESPYGGKRRSFDDRPTNADEDSVSDSLPLPSISTSSRESRWSDTTPYASKKKLQSWLQLSNGDWELVKIISTSGTESIISLPDGKVLKVKDENLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYSNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTSCHTYELFHTVATFQEALDVVHISKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFSAAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSKCHLPQIFASHMLTQSEKHVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLENTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRGYQARRHRRELWRGITTLQSYIRGEKNRKEYAAVLQRHRAAVIIQKWMKTVFARNRLKNINDAAVVIQSFIRGWLVRRCSGDIGLLKSGGMKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDERDYSWDVGSNHRRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSDGSIEKAKKKWWGRRNSTRIN 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi320g00011 1054 CDD MYSc_Myo8 193 744 IPR036022 -
Sebi320g00011 1054 FunFam Unconventional myosin-XIX 496 688 - -
Sebi320g00011 1054 ProSiteProfiles IQ motif profile. 757 784 IPR000048 GO:0005515
Sebi320g00011 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 822 IPR027417 -
Sebi320g00011 1054 MobiDBLite consensus disorder prediction 68 96 - -
Sebi320g00011 1054 Coils Coil 850 898 - -
Sebi320g00011 1054 Gene3D Kinesin motor domain 147 370 IPR036961 -
Sebi320g00011 1054 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 MobiDBLite consensus disorder prediction 917 931 - -
Sebi320g00011 1054 MobiDBLite consensus disorder prediction 97 120 - -
Sebi320g00011 1054 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 MobiDBLite consensus disorder prediction 68 120 - -
Sebi320g00011 1054 SMART iq_5 803 825 IPR000048 GO:0005515
Sebi320g00011 1054 SMART iq_5 780 802 IPR000048 GO:0005515
Sebi320g00011 1054 SMART iq_5 754 776 IPR000048 GO:0005515
Sebi320g00011 1054 PANTHER MYOSIN 358 1045 - -
Sebi320g00011 1054 SMART MYSc_2a 173 781 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 Gene3D - 500 643 - -
Sebi320g00011 1054 Gene3D Myosin VI head, motor domain, U50 subdomain 371 499 - -
Sebi320g00011 1054 ProSiteProfiles Myosin motor domain profile. 179 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 Pfam IQ calmodulin-binding motif 782 802 IPR000048 GO:0005515
Sebi320g00011 1054 Pfam IQ calmodulin-binding motif 758 775 IPR000048 GO:0005515
Sebi320g00011 1054 Pfam IQ calmodulin-binding motif 806 822 IPR000048 GO:0005515
Sebi320g00011 1054 MobiDBLite consensus disorder prediction 917 956 - -
Sebi320g00011 1054 Gene3D Kinesin motor domain 647 731 IPR036961 -
Sebi320g00011 1054 Pfam Myosin head (motor domain) 357 746 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 Pfam Myosin head (motor domain) 181 345 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi320g00011 1054 Gene3D - 780 824 - -
Sebi320g00011 1054 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi320g00011 Sebi-Chr320 146596 160408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi320g00011 7 1052 Myosins gene family AT1G50360 66.440 0.0 1498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi320g00011 - - gmx:100801124 1750.72