Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi31g00249 | ATGGGAAGAAGAAACTCATCACTGCAACAAAAACTTCGTCGTCGAGTGGAGGCCGTGTGCCCTACCGCCGACGAAATTGTCAATCATCTTCGGTTAACCTACTCTGATTACCAGCGAACCAAGCAGCAAACTCTGAAACGATTTGTTCAAGAAGCTCTTCAATCCACACGGAACCATGGCGATGAGGATGAGGATCGAAATTCCTCTCGAAAGAGACGGAAGGAAATTGACGAAGGTGATAAAGAGAGATTGCAAAATATGGAAGCGAGTATGCAAGTCCCATCGACCCCATCTTATTCAACTTCGGAGAGTGGCGAAGAAGACGGAACTGCGTCGGTGTCGTCAGTGGAACCTTGTCTTGACTTGATGAAGACAATGCTGCGGAATTCGTATACTGCAACTAAGGTTGTGGTGGAGGGAAAGAATGTTGAAATGGAGGTGAGCAATAGTGGTAAGGTCATTAACACTGTTAATGAAGGTGAAGCCAGGTCGGCGGGGAGGCAATTGAAGGGTTCTATCTCAAACGGCGGTGGTGATGATGATGTTGAGGTGAAGGGGAAGGAGAAGGGGAATGATGGGCCAAGGTTTAGGGATTTGGGTGGGATGAAAGAGGTTTTGGAGGAAGTGAAGAGGGAGGTGATTCTGCCGTTCTATCATCCCCACGTGCCTAAAGATTTAAAACCCTCTGGCATTTTGTTGCATGGACCTTCTGGCTGTGGGAAGACTATACTGGCTCGTGCTATTGCTAATGAGACTGGTCTTCCTTTCTATCAAATGGAGTCAGGTGCATTGGAAGAAAATATTAGACAGATTTTCTATAAAGCATATAGGACCACCCCATCAATTGTCTTTATTGATGAGATTGATGCAGTTGCTTCAAAAAGAGAGAATTTACAGAGGGATCGAATTGTTACTAAGTTAATTACTTGCATGGATCAACCACCTGATGATTTAGAGGGTCCTTCTGGCTCCATTCTTGTAATTGGAGCTACAAGTAGGCCAGATGCTATTGACCCTGCCCTTAGAAGGCGGTTTGATCGTGAGATTATTATTGGCATTCCTGATGAATCTGCTAGGGAAGATATCCTTTCCATGCTTATTACTCGCAATAATCTTAAACTCGAGGGTCCGATTGATCTACAAAAGATAGCCAGGGCTACACCAGGATTTGTTGGTGCTGATTTGGTAGCTCTGACTAAGCAGGCTAGTAATCTGGCAATGAATAAAATAGTTGATGAAAGGTATGTCACGAGTGAGCCTCCTGAAGATTGGTGTATAGAACCTTGGTTGACAGAAGAAGTGGATAAGCAGGCCATCAAAATGTCTGATTTTGAGGAAGCAGTCAAAAGGGTGCAACCATCAACCAAAAGAGAAGGGTTCTCTCCCATTCCTAATGTAAAATGGGAAGATGTTGGTGGGCTTGATCACTTAAGACAGGAGTTTGAAGACTATATTATAAGGCGTATAAAATATCCTGAGGATTATGAGAGATTTGGGTTGAAATCAGAGGCAGGAATTTTGCTTTATGGACCTCCAGGTTGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGCGGCAGGAGCTAATTTCAGACATATTAAGGTGGATGCTTTGGCAACCAAACGTGGTAAAGAAGGTGGATGGGTTACTGAACGACTATTGAACCAGTTGCTTATCGAGTTAGATGGCGCAGAGCAGCGAAGAGGTGTTTTTGTGATTGGTGCAACAAATAGGCCTGAGGTGATGGATCCTGCTCTTTTACGGCCTGGTAGGTTAGGAAAACTTCTTTACGTTCCTCTCCCAAGCCCAGACGAGCGAGTTTTAATATTGAAAGCTCTTACAAGGACGATACCTGTTGATGCCAGTGTGGATTTGAACGTCATAGGAACATCCGAAGCTTGTGACAACCTGAGTGGCGCTGATCTTGCTGCATTGATGAATGAAGCAGCACTGGCTGCTATTAGAGAGAGGAGGGCCTCAACTGATACAACTCGTGATACATTGAACACAGTCAAGACACATCATATTCACGAAGCACTGAGTAAAGTCTTTCCCTCTGTGTCAGACATGGAGTGTAAAAGAAAGAAGCGAGAAAGAAACGGGGGGAAATCAATCGTTTGGGAGAGAGTGGAAGAGGGGGAGAAAGGAGAAAAAGCGGTGTGGGACCGAGCAACAAATTTTCTCATCACCGGAAGCGAGGAAAAGGAGACTGGGAAGAAGACAACAATGACATTCGTTCTCCCACTTTTACCCATCATCCAAGTGCTAGCATCTACATTTTGTAAGTTGCAGTGA | 2298 | 0.4465 | MGRRNSSLQQKLRRRVEAVCPTADEIVNHLRLTYSDYQRTKQQTLKRFVQEALQSTRNHGDEDEDRNSSRKRRKEIDEGDKERLQNMEASMQVPSTPSYSTSESGEEDGTASVSSVEPCLDLMKTMLRNSYTATKVVVEGKNVEMEVSNSGKVINTVNEGEARSAGRQLKGSISNGGGDDDVEVKGKEKGNDGPRFRDLGGMKEVLEEVKREVILPFYHPHVPKDLKPSGILLHGPSGCGKTILARAIANETGLPFYQMESGALEENIRQIFYKAYRTTPSIVFIDEIDAVASKRENLQRDRIVTKLITCMDQPPDDLEGPSGSILVIGATSRPDAIDPALRRRFDREIIIGIPDESAREDILSMLITRNNLKLEGPIDLQKIARATPGFVGADLVALTKQASNLAMNKIVDERYVTSEPPEDWCIEPWLTEEVDKQAIKMSDFEEAVKRVQPSTKREGFSPIPNVKWEDVGGLDHLRQEFEDYIIRRIKYPEDYERFGLKSEAGILLYGPPGCGKTLIAKAVANAAGANFRHIKVDALATKRGKEGGWVTERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDPALLRPGRLGKLLYVPLPSPDERVLILKALTRTIPVDASVDLNVIGTSEACDNLSGADLAALMNEAALAAIRERRASTDTTRDTLNTVKTHHIHEALSKVFPSVSDMECKRKKRERNGGKSIVWERVEEGEKGEKAVWDRATNFLITGSEEKETGKKTTMTFVLPLLPIIQVLASTFCKLQ | 765 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi31g00249 | 765 | ProSitePatterns | AAA-protein family signature. | 571 | 589 | IPR003960 | GO:0005524|GO:0016887 | |
Sebi31g00249 | 765 | Gene3D | - | 461 | 537 | IPR027417 | - | |
Sebi31g00249 | 765 | Gene3D | - | 538 | 601 | IPR027417 | - | |
Sebi31g00249 | 765 | MobiDBLite | consensus disorder prediction | 88 | 111 | - | - | |
Sebi31g00249 | 765 | MobiDBLite | consensus disorder prediction | 54 | 115 | - | - | |
Sebi31g00249 | 765 | MobiDBLite | consensus disorder prediction | 180 | 195 | - | - | |
Sebi31g00249 | 765 | PANTHER | AAA-FAMILY ATPASE | 81 | 535 | - | - | |
Sebi31g00249 | 765 | SMART | AAA_5 | 502 | 603 | IPR003593 | GO:0016887 | |
Sebi31g00249 | 765 | SMART | AAA_5 | 227 | 355 | IPR003593 | GO:0016887 | |
Sebi31g00249 | 765 | Pfam | ATPase family associated with various cellular activities (AAA) | 506 | 535 | IPR003959 | GO:0005524|GO:0016887 | |
Sebi31g00249 | 765 | Pfam | ATPase family associated with various cellular activities (AAA) | 536 | 600 | IPR003959 | GO:0005524|GO:0016887 | |
Sebi31g00249 | 765 | Pfam | ATPase family associated with various cellular activities (AAA) | 231 | 351 | IPR003959 | GO:0005524|GO:0016887 | |
Sebi31g00249 | 765 | Gene3D | - | 354 | 451 | - | - | |
Sebi31g00249 | 765 | Pfam | AAA+ lid domain | 378 | 418 | IPR041569 | - | |
Sebi31g00249 | 765 | Pfam | AAA+ lid domain | 624 | 666 | IPR041569 | - | |
Sebi31g00249 | 765 | MobiDBLite | consensus disorder prediction | 56 | 85 | - | - | |
Sebi31g00249 | 765 | Gene3D | - | 195 | 455 | IPR027417 | - | |
Sebi31g00249 | 765 | MobiDBLite | consensus disorder prediction | 161 | 195 | - | - | |
Sebi31g00249 | 765 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 464 | 688 | IPR027417 | - | |
Sebi31g00249 | 765 | Gene3D | - | 602 | 692 | - | - | |
Sebi31g00249 | 765 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 196 | 458 | IPR027417 | - | |
Sebi31g00249 | 765 | ProSitePatterns | AAA-protein family signature. | 325 | 344 | IPR003960 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi31g00249 | Sebi-Chr31 | 2726023 | 2730774 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi31g00249 | 226 | 687 | Calmodulin-binding Proteins | AT3G56690 | 31.818 | 2.01e-72 | 253 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi31g00249 | K14571 | - | gmx:100809594 | 790.415 |