Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00237 ATGTCTCTCCCAGGCCGTCCTCGTATTGTAGTAAATGGGGTTCGAAGAACGAGAACCTTCCATTATTTCTGGTGCCTAAATTGCCAACGTACAGTGAGAATACCCTCTACAAATACAGATGCCTCTTCTTCATGTCCCTATTGCTTCCATCAATTGCATTATGAGCTTGATATCTCAAGGCCAAGGCTTCTCATGAACGTTCCTAATAACTTGGAACCTTCCCCTTCTACTCAGCTAATACATAGCTTGGCCCTCATGCTTGATCCATCTCCGAGAAGACAAAACAACCATTTGAACACAAGAACACAATGGGAAACAGAACATGAAGATAATAGTACAACTACAAATCCACAAGGTTGGATTACCCTCCGATTTGTTCCACCCACAAGGCCTATTTCCCCACCACAAAACTTTGCTCCTAATGCCACCCCTTTTGAGAATACATTAGATGATTTCATTGATGGGATGATTCAGAATAATAATAGACCAGGGCCACCTCCAGCATCATCTTCAGCCATTGCAGCCTTGCCAATGGTGAAAGTGACACAAGCACATTTGGCAAGTGACCCCAATTGTCCAATATGCAAAGATGAGTTTCAGCTTGATATGGAAGTGAGAGAGTTGCCATGCAAGCATTTCTATCATTCTGATTGTGTTGTCCCTTGGCTGTGCATGCATAATACTTGTCCTGTTTGCCGCTATGAGCTACAAGGTGCTTCTAATGCTAATTACCTTTTCCAAAATGAGAATTATGAGCAAAGGTTTGGTTTTGAGGATGTTACAAGCAGCTTGAACTGGATTTGGACCCAAGTAGCTTCCTTCAGGCCTATCCGTGCAGTAGCTCTTGGTGGCGAGCATTGCTTGTTTTATAGCTTCATCTGTGAGATTTCATACTGGAACCTGGTTTATTATGTTAGAATTATTCCATTTGATTACTATTATTTAGCAGGTAAAAGGTGCGGAGAACCTTATGTCAAGAACAAGGATGGAATTGATTAA 999 0.4184 MSLPGRPRIVVNGVRRTRTFHYFWCLNCQRTVRIPSTNTDASSSCPYCFHQLHYELDISRPRLLMNVPNNLEPSPSTQLIHSLALMLDPSPRRQNNHLNTRTQWETEHEDNSTTTNPQGWITLRFVPPTRPISPPQNFAPNATPFENTLDDFIDGMIQNNNRPGPPPASSSAIAALPMVKVTQAHLASDPNCPICKDEFQLDMEVRELPCKHFYHSDCVVPWLCMHNTCPVCRYELQGASNANYLFQNENYEQRFGFEDVTSSLNWIWTQVASFRPIRAVALGGEHCLFYSFICEISYWNLVYYVRIIPFDYYYLAGKRCGEPYVKNKDGID 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00237 332 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 105 236 - -
Sebi31g00237 332 FunFam E3 ubiquitin-protein ligase RING1-like 155 239 - -
Sebi31g00237 332 SUPERFAMILY RING/U-box 172 237 - -
Sebi31g00237 332 ProSiteProfiles Zinc finger RING-type profile. 192 233 IPR001841 -
Sebi31g00237 332 Pfam Ring finger domain 191 233 IPR001841 -
Sebi31g00237 332 SMART ring_2 192 232 IPR001841 -
Sebi31g00237 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 239 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00237 Sebi-Chr31 2606118 2607379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00237 1 243 C3H Transcription Factor Family AT1G68180 35.772 4.19e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00237 K11982 - gmx:100793656 380.948