Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00235 ATGTTGGTTGCTTCATCTTTTAGTTGTCACTTCTTTGTAGCTGGCATTTCAGATAAAGTTGCAGGGACTATAGGGATTGTTGTTGATCATAGAAGGAAGAACCGTTCTTTGGAGAGTCTTCAAGCTAATGTTCAGAGGCTGAAGACATACAAGGCGAAGTTAGTTGTCTTCCCAAGACGATCTCGTAAATTTAAGAATGGCGACTCTGCTCCAGAGGAGCTAGCTACAGCAACACAGGTCCAGGGTCTGTACATGCCCATTGTACGCGAGAGGCCATTTGTGGAGTTTACAAAAGTTACTGATGAGATGAAGTCATTCAAGGCATACTGTAAACTGCGTCTAAAGAGGACGAACCAGCGTCACATGGGTGCAAGGTTGAAGAAAGCTGCGGAGGCTGAGAAGGAAGAGAAGAAGTAA 417 0.446 MLVASSFSCHFFVAGISDKVAGTIGIVVDHRRKNRSLESLQANVQRLKTYKAKLVVFPRRSRKFKNGDSAPEELATATQVQGLYMPIVRERPFVEFTKVTDEMKSFKAYCKLRLKRTNQRHMGARLKKAAEAEKEEKK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00235 138 PANTHER 60S RIBOSOMAL PROTEIN L13 13 138 IPR001380 GO:0003735|GO:0005840|GO:0006412
Sebi31g00235 138 Gene3D - 98 138 - -
Sebi31g00235 138 Pfam Ribosomal protein L13e 14 116 IPR001380 GO:0003735|GO:0005840|GO:0006412
Sebi31g00235 138 Coils Coil 127 138 - -
Sebi31g00235 138 FunFam 60S ribosomal protein L13 97 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00235 Sebi-Chr31 2593493 2594519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00235 14 123 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 73.636 1.87e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00235 K02873 - mof:131156327 184.496