Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00223 ATGGAGGGTGAACGCAAACGCTTGACTACGCCACGGCTTGATCGGCGAAACGCCATGAAGAACATCGATTACCAAGTGGAAGTGGAAGATGATGAGGTGATGAATGTGTATTCTTCATCATCAGCTTCTTTGCTGAACAAAACGAGCTTCCGTGTGAAGGGAATTGATGGTGAATTCGACCATATATTCCGCAGTCTTGGCTTCTCTGGACCTGAAGACTTTGCCATCCCAACTTCAGCTTGGGAACAATCCCAAAAGGCTCGCTTTTCTTCTCCAATTCCCAACAAATTCAATCCAAAACTTGAACTTCAAACTGAAAAGGATATGAATAACGTTTCCTCTGAGAACAGAGATGGGGGGATCAAGGGTGTTAGGCCTCCGGTGTTGCGGGCAATTGTTGCTGCTGACGAGCTAGTGACTCCCCCTTTAGAAGAAGAGGAAAGGGATGTGCTAATTTGTGATTGTAGTGATGATGATGTTGGTGAAAAGGCTTTTTCTGATAGGGATATGGTTGAAGAGTACTCCAACTCCATGGATGATGTGTCCCCATCATCATCAATATCATATGGATATGATGGGTCCTTTAGACAGATTTTCGGGTCATGGCAAAAGGGCGACATTTTAGGGAAAGGCTCCTTTGGAACTGTCTATGAAGGCTTCACTCATGATGGGATATTTTTTGCAGTAAAGGAAGTTTCTTTGCTGGATGATGGAAGCCAAGGCAAACAGAGCATTTTTCAACTTCAGCAGGAAATATGTCTTTTGAGCCAATTCAAACACGACAACATAGTTCGATATATCGGTACTGACAAGGACGATGATAAGCTGTATATCTTTCTTGAGCTTGTAACAAAAGGATCATTGGCAAGTCTCTATCAAAAATATCGTTTAAAGGACTCTCAAGTTTCTGTATACACAAGACAAATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTCCACAGGGACATCAAGTGTGCCAATATACTGGTTGATGCAAATGGGTCTGTCAAGCTTGCAGATTTTGGGCTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAGGAATCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTAGGATGTCCAGTTTTAGAGATGTTGACCCGGCAACCTCCTTATTCTCATTTGGAAGGAATGCAAGCGTTATTTAGGATTGGGAATGGTCAACCTCCACCTGTTTCGGAATCTTTATCCAAAGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAATAAACGGCCAACTGCTGCTCAGCTATTGGATCATCCATTTGAAAAGGTCAATACATTTGCAGATAGTTACTACTTACTAGAGTTGGACTTACAAACTAAAGCTGGTTTGGTTATAATCACATTAGTCCACCATGCTGGTCCCTGA 1467 0.4233 MEGERKRLTTPRLDRRNAMKNIDYQVEVEDDEVMNVYSSSSASLLNKTSFRVKGIDGEFDHIFRSLGFSGPEDFAIPTSAWEQSQKARFSSPIPNKFNPKLELQTEKDMNNVSSENRDGGIKGVRPPVLRAIVAADELVTPPLEEEERDVLICDCSDDDVGEKAFSDRDMVEEYSNSMDDVSPSSSISYGYDGSFRQIFGSWQKGDILGKGSFGTVYEGFTHDGIFFAVKEVSLLDDGSQGKQSIFQLQQEICLLSQFKHDNIVRYIGTDKDDDKLYIFLELVTKGSLASLYQKYRLKDSQVSVYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCPVLEMLTRQPPYSHLEGMQALFRIGNGQPPPVSESLSKDARDFILKCLQVNPNKRPTAAQLLDHPFEKVNTFADSYYLLELDLQTKAGLVIITLVHHAGP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00223 488 ProSiteProfiles Protein kinase domain profile. 202 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00223 488 Gene3D Transferase(Phosphotransferase) domain 1 201 473 - -
Sebi31g00223 488 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Sebi31g00223 488 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 123 457 - -
Sebi31g00223 488 SUPERFAMILY Protein kinase-like (PK-like) 180 456 IPR011009 -
Sebi31g00223 488 FunFam Mitogen-activated protein kinase 1, putative, expressed 200 464 - -
Sebi31g00223 488 Pfam Protein kinase domain 203 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00223 488 SMART serkin_6 202 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00223 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00223 Sebi-Chr31 2471619 2475462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00223 175 454 MAP Kinase Kinase Kinase AT4G08500 67.021 1.49e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi31g00223 Pkinase 1.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00223 - K13414 gmx:100806902 597.816