Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00219 ATGGCGATGGCGTCATCGAGAAGTAGGAATGAGGATCTGCGAGGAGAGTGTTCTCTTTCAGCTGATGAGGTTTGGAAGGAGATCGTCGCCGGCAGCACTGATCAACAGAATATGACAGTAACACTTGAGGATTTCCTCACCAAGCCTCCTGCAGTCACAGACCAAGACACCATGCTCCTCCTCCCTCCTCAGACTCAAACTCAAAGCAATGAGAAGAATGGAATTGTTGCTGTTGGAGGAATTAGGGGAGGAAAAAGGAGGGCGGTGGCTGTGGAGGAAAGCCTTGATAAGGCCACTCTTCAGAAACAGAGAAGAATGATCAAAAACAGAGCGTCTGCCGCTAGGTCCAGGGAACGCAAGCAGGCTTACACACTTGAGCTAGAGTCTCTGGTTGTACAACTGGAGGAAGAGAATGCTCGATTGCAGAGGGAAGAGGCTGAAAAGAAGAAGCAGAGATTTAACCAGCTGATGAAGTGCCTCATCCCAGTTGTGGAGAAGCGTAAACCAGACGAATGCCTTCGGAGAGTGAATTCTGTCCATTGGTGA 546 0.4945 MAMASSRSRNEDLRGECSLSADEVWKEIVAGSTDQQNMTVTLEDFLTKPPAVTDQDTMLLLPPQTQTQSNEKNGIVAVGGIRGGKRRAVAVEESLDKATLQKQRRMIKNRASAARSRERKQAYTLELESLVVQLEEENARLQREEAEKKKQRFNQLMKCLIPVVEKRKPDECLRRVNSVHW 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00219 181 Pfam bZIP transcription factor 98 152 IPR004827 GO:0003700|GO:0006355
Sebi31g00219 181 SUPERFAMILY Leucine zipper domain 101 151 IPR046347 GO:0003700|GO:0006355
Sebi31g00219 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 151 IPR004827 GO:0003700|GO:0006355
Sebi31g00219 181 CDD bZIP_plant_BZIP46 101 147 - -
Sebi31g00219 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Sebi31g00219 181 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 100 156 - -
Sebi31g00219 181 Coils Coil 120 156 - -
Sebi31g00219 181 SMART brlzneu 97 159 IPR004827 GO:0003700|GO:0006355
Sebi31g00219 181 Gene3D - 100 158 - -
Sebi31g00219 181 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 179 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00219 Sebi-Chr31 2416820 2418540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00219 20 181 bZIP Transcription Factor Family AT5G44080 44.388 3.83e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi31g00219 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00219 K14432 - cit:102608488 169.474