Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00199 ATGGTGCCCTTTGTTTTGCCTCTCCTATTCTTCTCATTCTTAGTGGGGAATTCAAAGGGACTGCTCCAAGTGGGTTTCTACTCCAACACATGTCCTCAAGCAGAGTCCACTGTTCGTGCTGTTGTTAGAGATGCTGTTCTCTCTGACCCCAACATGGCTGCTGTCTTGCTCAGGCTTCAGTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATAGACAATGGTCCACAATCAGAGAAACAAGCATTTGCACATCAAGGGGTTAGAGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCTGACATAGTGACATTGGCAGCCAGAGATGCCATAGTCATGGCAAATGGACCAGGATACCAAGTTCCAACAGGGAGGAGAGATGGTTTGGTTTCTAATCTTTCACTTGCAGCTGATATGCCAGAAGTTGATGATTCAATTCAGGTACTCAAGGACAAGTTTCTGAAGAAGGGTCTCACAGAGAAAGACCTTGTTCTTCTCAGTGCTGCACATACAATTGGAACCACAGCATGCTTCTTCATGACCAAAAGACTGTACAATTTTTTCCCAAACGGTGTGGGATCAGACCCAGCTATTAGCCCAAACTTCCTACCAGAGCTGAAGGCAAGGTGTCCTAAGAATGGAGACGTTAATGCCCGTTTAGCCATTGATGAAGGGAGTGAGCAGAGATTTGACAAACACATTTTGAACAACATAAGGGAAGGTTTTGCTGTGCTACAATCTGATGCCAGGCTTAATGATGACATAATGACTAGGAATATCATTGACTCCTACCTTAGTCCCCTCAATCCATTATTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCAATTGTGAAGATGGGCCAAATTGGAGTCAAGACTGGTTTCCTTGGAGAGATTAGGCGCGTCTGCTCAGCATTCAATTGA 972 0.4465 MVPFVLPLLFFSFLVGNSKGLLQVGFYSNTCPQAESTVRAVVRDAVLSDPNMAAVLLRLQFHDCFVEGCDGSILIDNGPQSEKQAFAHQGVRGFGVIERAKAQLEASCPGVVSCADIVTLAARDAIVMANGPGYQVPTGRRDGLVSNLSLAADMPEVDDSIQVLKDKFLKKGLTEKDLVLLSAAHTIGTTACFFMTKRLYNFFPNGVGSDPAISPNFLPELKARCPKNGDVNARLAIDEGSEQRFDKHILNNIREGFAVLQSDARLNDDIMTRNIIDSYLSPLNPLFGPSFEADFVESIVKMGQIGVKTGFLGEIRRVCSAFN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00199 323 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601|GO:0042744
Sebi31g00199 323 SUPERFAMILY Heme-dependent peroxidases 22 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Sebi31g00199 323 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 Pfam Peroxidase 38 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 Gene3D Peroxidase, domain 2 155 302 - -
Sebi31g00199 323 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 FunFam Peroxidase 25 168 - -
Sebi31g00199 323 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 FunFam Peroxidase 155 302 - -
Sebi31g00199 323 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Sebi31g00199 323 PANTHER PEROXIDASE 25-RELATED 11 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00199 323 Gene3D - 25 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00199 Sebi-Chr31 2171492 2173711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00199 2 323 Peroxidase AT1G77100 55.864 1.03e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00199 K00430 - gmx:547549 543.117