Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00198 ATGGGAAGGGCTCCTTGCTGTGACAAAGCCAACGTCAAGAAAGGACCATGGTCTCTTGAAGAAGATTCCAAACTCAAGTCTTACATTGAGCAGCATGGCACCGGTGGTAATTGGATTGCCCTACCACAGAAGATAGAAACACAGTTACCAGGCCGCACAGATTATGACATAAAGAACTACTGGAACAGAAGGCTGAAGAAGAAGTTTCTAGGCAAGCAAAGGAAGGAGCAAGTTCGCAGAGTAAGCAATAACTTGAAGCAAGAGATGAAAAGAGAAACGGAGAATTTGATGGTGTCTTCTGCTTCAGGAATACAACCTCCCTATTGGACTCCACAATATTCCATCCCAGTGCCAAATAATATTTCATCCATCCAACAATGTGATCTCACTAATCAAACATCCTTCCTCAATAACAAACTTCCTTCAGGCGCTGGAATTAGATTCTCCCTGCAGGATCATCAACAGCCATACACAATCACTCCCACCACCACCATTAATTCACAAGATGCATGTGGCATTCCCTCCACACAAGACCAGCCTTATAATAAGTTTGAACACTCACCTAGTGAAATTGTACTGATAAATATTATGAAAGGTAAGACAAAGATAATCAAGGATGCCCTTTGA 627 0.4226 MGRAPCCDKANVKKGPWSLEEDSKLKSYIEQHGTGGNWIALPQKIETQLPGRTDYDIKNYWNRRLKKKFLGKQRKEQVRRVSNNLKQEMKRETENLMVSSASGIQPPYWTPQYSIPVPNNISSIQQCDLTNQTSFLNNKLPSGAGIRFSLQDHQQPYTITPTTTINSQDACGIPSTQDQPYNKFEHSPSEIVLINIMKGKTKIIKDAL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00198 208 Coils Coil 75 95 - -
Sebi31g00198 208 Gene3D - 11 69 - -
Sebi31g00198 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 69 IPR017930 -
Sebi31g00198 208 ProSiteProfiles Myb-like domain profile. 9 65 IPR001005 -
Sebi31g00198 208 SMART sant 13 67 IPR001005 -
Sebi31g00198 208 PANTHER OS09G0431300 PROTEIN 45 169 - -
Sebi31g00198 208 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Sebi31g00198 208 SUPERFAMILY Homeodomain-like 8 70 IPR009057 -
Sebi31g00198 208 CDD SANT 16 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00198 Sebi-Chr31 2167553 2168625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00198 1 76 MYB Transcription Factor Family AT3G49690 52.419 4.63e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi31g00198 Myb_DNA-binding 3.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00198 K09422 - pop:7467242 156.762