Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00196 ATGGTGAACGTTCCAAAGACGAAGAAGACATACTGTAAGAGTAAGGAATGCAGGAAGCACACACTGCACAAGGTGACCCAATACAAGAAGGGTAAGGATAGCATTGCTGCTCAAGGGAAGCGCCGTTACGACCGCAAACAGTCCGGTTATGGTGGTCAGACTAAGCCTGTTTTCCATAAGAAGGCAAAAACCACCAAGAAAATTGTCCTGAGGCTGCAGTGCCAGGGCTGCAAGCATGTGTCCCAACATCCTATCAAGAGGTGCAAGCACTTTGAGATTGGTGGTGACAAGAAGGGCAAAGGAACCTCTCTGTTCTAG 318 0.4843 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00196 105 Gene3D - 1 105 - -
Sebi31g00196 105 FunFam 60S ribosomal protein L44 1 105 - -
Sebi31g00196 105 SUPERFAMILY Zn-binding ribosomal proteins 2 94 IPR011332 GO:0006412
Sebi31g00196 105 ProSitePatterns Ribosomal protein L44e signature. 63 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Sebi31g00196 105 MobiDBLite consensus disorder prediction 28 56 - -
Sebi31g00196 105 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 1 105 IPR000552 GO:0003735|GO:0005840|GO:0006412
Sebi31g00196 105 MobiDBLite consensus disorder prediction 28 48 - -
Sebi31g00196 105 Pfam Ribosomal protein L44 19 94 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00196 Sebi-Chr31 2161312 2162099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00196 1 105 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 92.381 3.88e-68 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00196 K02929 - twl:119995110 224.172