Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00181 ATGTCGGGTTGTGGTTATTTCAATATGAAAAGGTCGTTGTTGATGGTGTTTGTTTTGGTTGCTGTGGCTGTTGATAACAAATTAGTGCATGGTCAAGGCTCGCGTGTAGGTTTCTATTCGTCTACATGTCCTCGCGCTGAGTCCATTGTTAAATCCACAGTTGAATCCCACGTTAAATCTGACCCTACATTTGCTGCTGGGTTACTTAGGATGCACTTCCACGATTGCTTCGTGAGAGGTTGTGATGCTTCTGTTCTCATTGCTGGCGCTGGCACTGAGAGAACAGCATTTGCAAATCTTGGTTTGAAAGGATTTGAGGTCATTGATGATGCCAAGGCAAAGCTCGAGGCTGCCTGCCCTGGTGTTGTCTCATGTGCTGACATCCTTGCCCTTGCTTCACGTGATGCCGTTAGTGGTGGAGTGAGTTGGCAAGTTCCTACTGGACGCAGAGATGGGCGCGTGTCACAGGCTTCAGAGGTCAACGATTTGCCTGGCCCTTCTGACTCTGTTGCTGTACAGAAACAAAAATTTGCAGCAATGGGTCTCAACACTCAAGACCTCGTCACCCTTGTTGGTGGGCATTCCATTGGTACAACAGCTTGCCAATTCTTGAGGAACAGATTGTACAACTTCACTGCAAATGGTGCTGATCCTTCCATCGACGCTTCATTTCTTCCCCAACTACAATCACTCTGCCCCCAAAACAGTGGCGCTTGA 717 0.4798 MSGCGYFNMKRSLLMVFVLVAVAVDNKLVHGQGSRVGFYSSTCPRAESIVKSTVESHVKSDPTFAAGLLRMHFHDCFVRGCDASVLIAGAGTERTAFANLGLKGFEVIDDAKAKLEAACPGVVSCADILALASRDAVSGGVSWQVPTGRRDGRVSQASEVNDLPGPSDSVAVQKQKFAAMGLNTQDLVTLVGGHSIGTTACQFLRNRLYNFTANGADPSIDASFLPQLQSLCPQNSGA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00181 238 CDD secretory_peroxidase 35 237 IPR033905 GO:0004601|GO:0042744
Sebi31g00181 238 Gene3D - 37 163 - -
Sebi31g00181 238 ProSiteProfiles Plant heme peroxidase family profile. 33 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PANTHER PEROXIDASE 25-RELATED 18 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 SUPERFAMILY Heme-dependent peroxidases 35 237 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 Pfam Peroxidase 50 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi31g00181 238 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Sebi31g00181 238 FunFam Peroxidase 37 176 - -
Sebi31g00181 238 Gene3D Peroxidase, domain 2 164 236 - -
Sebi31g00181 238 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00181 Sebi-Chr31 1979229 1980344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00181 9 235 Peroxidase AT5G64120 62.185 3.50e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00181 K00430 - gmx:100783523 361.688