Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00179 ATGTTGGAGAAATGTGTCTGTGATTTCATCGAGCAGTTCAGCCCTTCACTTGTAAAATCCCATGCCATAGCTTCCAACACTACTTTGATCACTCTCAATTGCACCATGGGGTTTCCCCTTTTTGTTCTCCAACATATTACTTTTTCTGTCCTTGCTATTCTAAACACACATGTTATAGCTCAAGAAGGTCCTATAAGTCACCCTGAAGAGAAAGATGCTCTTTTTGGTCTCAAGGCCACTTTCAACCACCCTTTTCTAAATGATAACTGGACTGGCCTCCACTGCAATGCCAATGGTTCATCAAGGTGGTTCGGGGTTCAGTGTGCCAATGGTCGTGTCACAGAGTTGTCTATGCTGAGTTTCAAGAACAATTCTTTACAGGGAAATGTGATGAATTTCTCTAATAATCACCAAATGAAGTACATTGATTTGTCAGGCAATGTTTTCCATGGGCCAATATCAAAATCCCTCTTGAGTCTTAACCTCTTGGAAATGTTGTTTCTGCAAGATAATAGGCTCATAGGTTCAATACCAGAGTTTAGTCAATCAAGATTGGAGATATTTAATGTCTCAAATAACAACCTTGAGGGTCCAATCCCAATCACTCCAACTCTCCTATCAATTGACCCTGCTTCATACTCTGGAAATCCTAGATTATGTGGTCCACCTTCTCCTAATTCCTGTAACACTACTGAATCCAATTCTCCTTTCCCACTAGTACTACCCTTAAATGGCACAGACAACAGTGAAGTCCAAGATAAACCTTCAAATAAAAATAACAGTTCCAATATTTTGTTAATATTCAATGTGGGTCTTCTGCTTGCGATTATAATGCTACTGATTCTTTACTTTACAACATCCAGAAAGCTCAATAAAATAGTGAGGGGACAGATTACCACAGTTGAAGAAAAAGAGAAAGATGTGGAGATCAGTATTGAAAAGAAGGTAGAGATAGGGGAGGGGACAACAATGATGACAGTAGAAGAGAGAAAGGAACTCATATTCTTTAATAATAAGCCAAAATTTCAAATGAGTGAACTTCTTAGAGCCTCTGCTGAGGCACTAGGTCATGGAATCATGGGGAATAGTTATAAGGCTATGCTGAATGATGGACCTACCGTTGTTGTAAAGCGGCTAAGGGACTTGAAACCACTCACTAAGGAGGAATTTGCAAAGATAGTGCAAATGATTGCTGATCTCAAGCACCCAAATTTGTTGCCTTTGCTTGCTTACTACCATTCCAGAGATGAGAAGCTGATGCTTTATAGATATGCAGAGAATGGAAATCTTTTCTCTCGACTTCATGATGGCAGAGGTGGAAACAGGGTTCCATTCAGTTGGAGCTCAAGATTGTCAGTGGCACGAGGCGTGGCTCGAGCATTGGAGTATCTACACCTCAACAATAGGTATCATAACATTGTCCCTCATGGCAACTTGAGGTCTTCAAATGTACTCTTTGATGACAACGATACAGTTCTTGTCTCTGACTACAGCCTTGCCTCATTGATAGCACAACCAATTGCAGCTCAACATATGGTTGTTTATAAATCACCTGAATATGGGTATTCAAGAAAGGTTACAATGCAATCTGATGTTTGGAGCTATGGATCCCTTCTAATAGAACTTCTAACTGGCATAGTATCTGTTTGCTCAGCTCCACAAGGGACTAATGGCGTGGATCTATGCAACTGGGTTCACAGAGCTGTGAGAGAAGAATGGACTGCTGAGATCTTTGACAAAGAAATTTCTACCCAAAAGAGTGCACTTCCTGGTATGCTAAGGTTGCTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCAGAGAAACGTCCTGAGATGAGAGAGGTGGTGAGAGAAGTGGAGAAAATACATGCCCCCATTATCTCTGAAGATGAGGATGATGTATCCGGGGATAGGTCTCTAACTGATGATTCCTTTTCAACCAGTACTACCTCAGGGATTATTGGAGATGAAAGATAG 1980 0.4101 MLEKCVCDFIEQFSPSLVKSHAIASNTTLITLNCTMGFPLFVLQHITFSVLAILNTHVIAQEGPISHPEEKDALFGLKATFNHPFLNDNWTGLHCNANGSSRWFGVQCANGRVTELSMLSFKNNSLQGNVMNFSNNHQMKYIDLSGNVFHGPISKSLLSLNLLEMLFLQDNRLIGSIPEFSQSRLEIFNVSNNNLEGPIPITPTLLSIDPASYSGNPRLCGPPSPNSCNTTESNSPFPLVLPLNGTDNSEVQDKPSNKNNSSNILLIFNVGLLLAIIMLLILYFTTSRKLNKIVRGQITTVEEKEKDVEISIEKKVEIGEGTTMMTVEERKELIFFNNKPKFQMSELLRASAEALGHGIMGNSYKAMLNDGPTVVVKRLRDLKPLTKEEFAKIVQMIADLKHPNLLPLLAYYHSRDEKLMLYRYAENGNLFSRLHDGRGGNRVPFSWSSRLSVARGVARALEYLHLNNRYHNIVPHGNLRSSNVLFDDNDTVLVSDYSLASLIAQPIAAQHMVVYKSPEYGYSRKVTMQSDVWSYGSLLIELLTGIVSVCSAPQGTNGVDLCNWVHRAVREEWTAEIFDKEISTQKSALPGMLRLLQIAMRCIERFPEKRPEMREVVREVEKIHAPIISEDEDDVSGDRSLTDDSFSTSTTSGIIGDER 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00179 659 MobiDBLite consensus disorder prediction 628 659 - -
Sebi31g00179 659 ProSiteProfiles Protein kinase domain profile. 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00179 659 Gene3D Ribonuclease Inhibitor 69 182 IPR032675 -
Sebi31g00179 659 Gene3D Phosphorylase Kinase; domain 1 316 424 - -
Sebi31g00179 659 Gene3D Transferase(Phosphotransferase) domain 1 425 641 - -
Sebi31g00179 659 SUPERFAMILY L domain-like 95 224 - -
Sebi31g00179 659 MobiDBLite consensus disorder prediction 641 659 - -
Sebi31g00179 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 115 624 IPR046959 -
Sebi31g00179 659 Pfam Protein tyrosine and serine/threonine kinase 353 619 IPR001245 GO:0004672|GO:0006468
Sebi31g00179 659 SUPERFAMILY Protein kinase-like (PK-like) 353 624 IPR011009 -
Sebi31g00179 659 SMART serkin_6 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00179 659 Gene3D Ribonuclease Inhibitor 183 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00179 Sebi-Chr31 1962789 1965395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00179 74 653 Receptor kinase-like Gene Family AT2G36570 32.322 6.30e-88 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi31g00179 PK_Tyr_Ser-Thr 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00179 - - pcin:129284917 746.888