Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00176 ATGCAGATACAGATGACGCTTTTCAAACCTCTGACTCTGAAGTTGAACCAGCACAGTCGCCGCCTCAACTATTGCACCTCTATTCGGTGCTCAGCTGCTGCTTCTTCCGCAGGTGGTGGTAGTGGGGACGACGATACTATTGTTCTTCATGTTGGGGGAATGATGTGCGAGGGATGCGCAGATAATGTCAAAAGAATTCTAGAAAGTCGACCACAAGTTTCATCTGCTAGTGTAAACCTAACATCCGAGATAGCAATAGTTTCCCCCGTATTTGAAGAAAAAACTGCACCAAATTGGCAAAAGCGATTGGGGAAGGCACTTGCAGAGCATTTAACTAGTTGTGGTTTCAGTTCTAACCTTCGAGTTAATTTGATTTACATGAAGCTTAATGGGTTTAAGTGGCAGGTCAGGAGGATAGCGGCTAAAGGAGTTCTTATTTCACCATATAAATGCAAGAGTGGTCATCTTGAGTCAATGGTGGCCCTGCATGGCTGA 495 0.4485 MQIQMTLFKPLTLKLNQHSRRLNYCTSIRCSAAASSAGGGSGDDDTIVLHVGGMMCEGCADNVKRILESRPQVSSASVNLTSEIAIVSPVFEEKTAPNWQKRLGKALAEHLTSCGFSSNLRVNLIYMKLNGFKWQVRRIAAKGVLISPYKCKSGHLESMVALHG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00176 164 SUPERFAMILY HMA, heavy metal-associated domain 45 88 IPR036163 GO:0046872
Sebi31g00176 164 ProSiteProfiles Heavy-metal-associated domain profile. 45 119 IPR006121 GO:0046872
Sebi31g00176 164 ProSitePatterns Heavy-metal-associated domain. 51 80 IPR017969 GO:0046872
Sebi31g00176 164 CDD HMA 48 116 IPR006121 GO:0046872
Sebi31g00176 164 FunFam Copper-transporting ATPase PAA1, chloroplastic 45 120 - -
Sebi31g00176 164 Pfam Heavy-metal-associated domain 49 116 IPR006121 GO:0046872
Sebi31g00176 164 Gene3D - 45 123 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00176 33 135 Primary Pumps ATPases AT4G33520 55.340 1.68e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00176 K17686 - gmx:100789076 132.494