Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00174 ATGATAGACGGAAAGGGTGAGGTGGGGCTGAGCTATATGGATAGTCTCTGTTGCTTCAACTCTGTCAATCAGGTGGGTGGAGGACGTTCTTCATGTAGCTCTGGCAAGGGCAAGAGCCATCAGTGCCCAGTTAAGTATGGATTTAGCCTAGTTAAAGGGAGAGCAAACCACCCAATGGAGGACTATCACGTAGCAAAAATTACCCAGTTCAGAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCGGCCTATTTACAAAAGCATCTCTTCTCTAATATCTTGAAGGAAGAGGACTTCTGGACTGATCCAAACAGTTCCATCATTAAAGCTTATGAGACAACAGATCAGGCCATTCTTTCTCACAGTGCTGATTTGGGGCGAGGAGGATCGACTGCAGTGACTGCCATTCTTATAAATAATCAGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCCATACAGATGACTATTGATCATGAGCCCAATACTGAAAGGGGCATCATTGAGAACAAAGGAGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGGGCATTTGGAGACAAAAATCTCAAGTCACACTTGAGATCTGATCCTGACGTACAGGATGAAGAGATTGGCCCAGATACTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGTTCGTTTCAAGGGATGATGATTGTAGGGAACGTGACTACTCCCTAGTCCCTACATTTTCAGGTTTGGAATTTTCTGCAACATAG 828 0.4517 MIDGKGEVGLSYMDSLCCFNSVNQVGGGRSSCSSGKGKSHQCPVKYGFSLVKGRANHPMEDYHVAKITQFRGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPNSSIIKAYETTDQAILSHSADLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAIQMTIDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQDEEIGPDTELLILASDGLWKFVSRDDDCRERDYSLVPTFSGLEFSAT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00174 275 SMART PP2C_4 41 264 IPR001932 -
Sebi31g00174 275 SUPERFAMILY PP2C-like 40 254 IPR036457 -
Sebi31g00174 275 ProSiteProfiles PPM-type phosphatase domain profile. 45 275 IPR001932 -
Sebi31g00174 275 Gene3D - 29 259 IPR036457 -
Sebi31g00174 275 Pfam Protein phosphatase 2C 54 254 IPR001932 -
Sebi31g00174 275 PANTHER PROTEIN PHOSPHATASE 39 256 IPR015655 GO:0004722|GO:0006470
Sebi31g00174 275 FunFam Probable protein phosphatase 2C 39 36 259 - -
Sebi31g00174 275 CDD PP2Cc 44 254 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00174 Sebi-Chr31 1912421 1916257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00174 13 248 PP2C-type Phosphatase Gene Family AT1G34750 74.262 7.76e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00174 K17506 - gmx:100787659 414.846