Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00133 ATGGCAAACGCTCATTTATCAACACAACGTAATCCGCCGAGGGTTCCAAATCTCATCGGTGGCAAATTTGTCGAGTCAAAATCATTGTCTTTCATTGATGTTATCAACCCTGCAACGCAACAAGTTGTTTCACAACTTCCTTTGACTACAGATGAAGAGTTTAAAGCTGCAGTAGCTGCAGCAAAGAAGGCATTTCCAGCATGGCGTAACACTCCAATCACAAAACGCCAACGTGTTATGTTGAAGTTCCAGGAGCTTATACGCAGGGATATGGATAAACTTGCCCTGAATGTGACCACTGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTCCGAGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAGATGGGGGAGTATGCTTCCAATGTATCACGTGGAATTGATACCTTCAGCATTAGAGAACCACTTGGTGTTTGTGCCGGTATTTGTCCGTTCAACTTTCCTGTTATGATTCCCTTGTGGATGTTCCCAATTGCAGTTACCTGTGGCAATACCTTTATTCTAAAACCATCAGAGAAAGATCCAGGTGCTTCTATAATGCTTGCAGAATTGGCAATGGAAGCTGGTTTGCCAGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATGTTGTAAATGCTATTTGTGATCATGACGACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATGCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAATCTAACATGGGGGCCAAGAATCATGCTGTTGTCATGCCTGATGCAAGTGCTGATGATACTATAAATGCTTTAGTTGCTGCGGGTTTTGGTGCTGCCGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCAAAATTGTGGGAAAGTAAACTTGTGGAGCGTGCCAAATCTCTTAAAGTAAATGCTGGAACTGAACCTGATGCTGACCTTGGTCCAGTCATTAGCAAACAGGTCCCCAAATATGAATCTGGTAATTTTATTGGTCCAACCATCTTAGCAGATGTCACTGCCGATATGGAATGCTATAAGGAGGAGATTTTTGGCCCAGTTCTTCTTCTCATGGAGGCTGATAGCTTGGAAGAGGCCATAAACATTATCAACGGAAACAAGTATGGAAATGGTGCTACTATATTTACTAAATCCGGTGTGGCTGCAAGGAAATTTCAGACAGAGATTGAGGCTGGGCAGGTGGGCATCAACGTTCCCATTCCTGTTCCTTTACCCTTTTTCTCTTTCACCGGCAACAAGGCATCATTTGCAGGCGATCTCAATTTCTATGGCAAGGCAGGGGTTAACTTTTATACACAGATAAAAACAATAACGCAGCAGTGGAAGGATTCAGCTAGCGCGGAGAAGATTAACTTAGCAATGCCAACCTCTCAAAAATCTTGA 1452 0.4325 MANAHLSTQRNPPRVPNLIGGKFVESKSLSFIDVINPATQQVVSQLPLTTDEEFKAAVAAAKKAFPAWRNTPITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYASNVSRGIDTFSIREPLGVCAGICPFNFPVMIPLWMFPIAVTCGNTFILKPSEKDPGASIMLAELAMEAGLPEGVLNIVHGTHDVVNAICDHDDIKAISFVGSNVAGMHIYARAAAKGKRVQSNMGAKNHAVVMPDASADDTINALVAAGFGAAGQRCMALSTVVFVGGSKLWESKLVERAKSLKVNAGTEPDADLGPVISKQVPKYESGNFIGPTILADVTADMECYKEEIFGPVLLLMEADSLEEAINIINGNKYGNGATIFTKSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSASAEKINLAMPTSQKS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00133 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 430 460 IPR016162 GO:0016491
Sebi31g00133 483 CDD ALDH_F6_MMSDH 15 464 IPR010061 GO:0004491
Sebi31g00133 483 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 17 337 IPR010061 GO:0004491
Sebi31g00133 483 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 285 296 IPR016160 GO:0016491
Sebi31g00133 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 19 259 IPR016162 GO:0016491
Sebi31g00133 483 SUPERFAMILY ALDH-like 12 465 IPR016161 GO:0016491
Sebi31g00133 483 Pfam Aldehyde dehydrogenase family 23 337 IPR015590 GO:0016491
Sebi31g00133 483 Pfam Aldehyde dehydrogenase family 339 460 IPR015590 GO:0016491
Sebi31g00133 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 260 337 IPR016163 GO:0016620
Sebi31g00133 483 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 6 337 IPR010061 GO:0004491
Sebi31g00133 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 339 429 IPR016163 GO:0016620
Sebi31g00133 483 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 19 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00133 Sebi-Chr31 1446119 1451572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00133 7 448 Aldehyde Dehydrogenase Gene Family AT2G14170 78.511 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00133 K00140 - gmx:100783569 855.899