Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00131 ATGGATGTTCAAAGCAGCTCAGAATTGAATGAAACTACACATATGCTTCCACCTCCCCCTGGCACATTTGTAGATCGTGAAGAACTCATCCAGTATGTTGGAGACTTTTCTGTGTCCCAAGGATATGTAGTCACTATCAAGCAATCCAAGAGGGACAAAGTAGTTGTACTTGGTTGTGACAGAGGGGGTGTTTATCACAATCGGCGAAAACCTGTTGAGGATTCCTCAGCTGAACATAGCCGCAAAAGAAAAACTGGTTCACGTCTAACAAATTGTCCTTTTGAAGCTGTGGGCAAGAAGGAAGATGGCTTGTGGGTACTCACCATAAAAAATGGAACACATAATCATGAGCCATTAAGGGACATTTCAGAACATCCTTCTGCTCGTCGCTTCACGGAGAGCGAAGTTTTGCTCATTAAGGAAATGACAGAAGCTGGGTTTAAACCTCGACAAATTCTAAAGAGACTGAGACAAAGCAATCCAGAACTTTTATCAACCCCAAAGCATGTTTATAATGTTAAAGCTAAGCTTAGACAAGGAAACATGAATGTTAGGAATTTCAAGTCACTGAGACCTGAGAAATCTGCCGTAAGAAATAATTATCTTGCAGTAATTGAACCATCATGGAGGCAGCGCAACCCTCCGAGGGTTCCCAATCTTATTGGAGGCAGATTTGTTGATTCACAGTCATTTGCATCAATTGACATTTTAAACCCTGCAAGCCAGCAAGTTGTTTCTCAAGTTCCATTGACTACAGATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGGGCTTTTTCATCGTGGCGTAACACGCCAGTTACCACTCGGCAGAGAATCATGTTTAAGTTCCAAGAGCTTATTCGTAGGGACATTGATAAGATTGCTATGAATATTAGTACTGAACATGGAAAAACATTGCGAGATGCATATGGTGATGTGTCATGTGGGCTAGAGGTTGTTGAACATGCTTGTGGTATGGCAAATCTGCAAAAGGGGGAATTTGTTCCCAATGTGTCCAATGGAATAGACACATACAGCATTAGAGAGCCCCTTGGTGTTTGTGCTGGTATCTGCCCTTTTGACTTCCCGGCTATGATTCCCTTATGGATGTTTTCTATTGCTGTTACATGTGGAAATACATTTATTCTAAAGCCGTCAGAGAAGGATCCAGGGGCAGCTGTGATGCTGGCAGAGTTAGCAATAGAGGCTGGTATACCTAATGGTGTGTTGAATATTGTTCATGCACTGATCAATTTCTTCCTCACTTTTCAAAATTGTTTCGGACAGGACATTCTCAATGCTATCTGTGATGATGATGATGATATAAAAGCTGTCTCCTTTGTTGGTTCAGATACAGTTGGTGCTTATGTATACACAAGAGCATCTACTAAAGGTAAACGTGTCCAGTCCAATATTGGAGCCAAAAATCATGCTGTCATAATGCCTGATGCAAGAGAGGATGCTACTTTGAAAGCTCTAGTTACAGCTGGTTTTGGTGCTGCTGGACAGAAATGCACAACACTCAGTGCTGTTATTTTCGTTGGAAGTTTCAAACAATGGGAAGATAAACTAATAGAGCGTGCCAGAGCACTTAAGGTCAATGCTGGAACAGAACCAGACACAGACCTCGGTCCAGTTATCAACAAACAGGCAAAGGAACACACTTGCAGATTGATTCAAAAAGGTGTAGAATCTGGTGCAAAACTAGTGCTTGATGGCCGAAACATTGTGGTTCCAGGATATGAACATGGAAACTTCATTGGTCCCACCATCTTATCTGATGTCACAATTGACATGGAATGCTACAAGGAGGAGATTCTTGGCCCAGTTCTTCTGTGTATGGAGGTTGACAGAATGCAAGAAGCCATAAATATCGTCAACAGCAACAAATATGGTACTGGAGCTTCCATTTTTACAACTTCAAGTGCAGCTGCAAGAAAATTCCAGACTAAGGTTGAAGTTGGTCAGGTTGGCATAAATGTCCCCATCTCTGTTTCGTTGCCCTTTTCTTCCTTCATTAGCTCCAGGCCATCTTTTGTTGGTGATTTGAATTTTGATGCAGGCAGAGCTGGAATTCTGTTTTACACGCAGATTAAGACTGTTACTAAACAATGGGCAGACTCATTAGACGGAGATGAAACTCCTCTTGAAATGCGTTGTGCTTAG 2172 0.4194 MDVQSSSELNETTHMLPPPPGTFVDREELIQYVGDFSVSQGYVVTIKQSKRDKVVVLGCDRGGVYHNRRKPVEDSSAEHSRKRKTGSRLTNCPFEAVGKKEDGLWVLTIKNGTHNHEPLRDISEHPSARRFTESEVLLIKEMTEAGFKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNMNVRNFKSLRPEKSAVRNNYLAVIEPSWRQRNPPRVPNLIGGRFVDSQSFASIDILNPASQQVVSQVPLTTDEEFKAAVFSAKRAFSSWRNTPVTTRQRIMFKFQELIRRDIDKIAMNISTEHGKTLRDAYGDVSCGLEVVEHACGMANLQKGEFVPNVSNGIDTYSIREPLGVCAGICPFDFPAMIPLWMFSIAVTCGNTFILKPSEKDPGAAVMLAELAIEAGIPNGVLNIVHALINFFLTFQNCFGQDILNAICDDDDDIKAVSFVGSDTVGAYVYTRASTKGKRVQSNIGAKNHAVIMPDAREDATLKALVTAGFGAAGQKCTTLSAVIFVGSFKQWEDKLIERARALKVNAGTEPDTDLGPVINKQAKEHTCRLIQKGVESGAKLVLDGRNIVVPGYEHGNFIGPTILSDVTIDMECYKEEILGPVLLCMEVDRMQEAINIVNSNKYGTGASIFTTSSAAARKFQTKVEVGQVGINVPISVSLPFSSFISSRPSFVGDLNFDAGRAGILFYTQIKTVTKQWADSLDGDETPLEMRCA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00131 723 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 475 675 - -
Sebi31g00131 723 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 219 707 IPR010061 GO:0004491
Sebi31g00131 723 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 475 675 IPR016163 GO:0016620
Sebi31g00131 723 SUPERFAMILY ALDH-like 209 708 IPR016161 GO:0016491
Sebi31g00131 723 MobiDBLite consensus disorder prediction 66 87 - -
Sebi31g00131 723 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 52 712 IPR010061 GO:0004491
Sebi31g00131 723 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 221 677 IPR016162 GO:0016491
Sebi31g00131 723 MobiDBLite consensus disorder prediction 66 85 - -
Sebi31g00131 723 MobiDBLite consensus disorder prediction 1 21 - -
Sebi31g00131 723 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 221 481 - -
Sebi31g00131 723 CDD ALDH_F6_MMSDH 217 707 IPR010061 GO:0004491
Sebi31g00131 723 Pfam Aldehyde dehydrogenase family 225 703 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00131 Sebi-Chr31 1430889 1440020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00131 186 706 Aldehyde Dehydrogenase Gene Family AT2G14170 67.241 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00131 K00140 - cave:132177147 1133.24