Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00130 ATGGTGGCATGCCAATTCTGTAAGTGTATTCATCTACTTCCTTATTTGGACTTAACCATCCTAATTTTGGCTTTGATAATCCCTCAGGCTGCTCTCTTAGACTTCACCTTTCAGCAATTTCACAATAATGAAGATGCCTTGAATCTTGTTGGAGATGTTTATCATGACAATGGAGCTCTCCAACTCACCCAGTCTAAGAAAGACAGTGCTGGCAGGGTCACATATTACAAACAACTTCATCTTTGGGACAAGGACTCAGGAAAACTCACAGACTTTACTTCCAAATTCTCCTTCATTATCAATCAACCATACAAAGCCCAATTTGGAGATGGCATCACATTCTTCCTTGCCAGCCCAAACTTTCCACTTCCTGTCCCTCCAGATGGAGCTGGTATTGGCCTTGTGGGACGTCAACAAATGCAAGATCCAAATTACACAAATGAGCATCCATTTGTGGCTGTTGAGTTTGACACCTCTCCAAATGATCCATTTGATCCTCCATATGACCATGTAGGATATAAGAATAATATCACTGTCAAACAACACTACTCTCATGTAGTCGATTTGAGAGACTTCCTACCAGAGTGGTTTGGACTTGAAGTGGTCAATAATGGGAGTTTCAAGTCAGACTCAGAGGTGCACAGGAATGAAATTAGCAGGACAAAGCTGGTGAAAGTGCTCATAGGATGGTGCCACAAGAAAAATGATCTTCTTCTCATCTATGAGTTCATGTCAAATGGAAGCCTTGATTCCCATTTGTATGGAGGGAAAAGCCTTCTGACTTGGGCAGCAAGATACAACATTGCTGGAGGCCTAGCCTCAGCATTATTGTACCTACATGAAGAATGGGAACGTTGTGTGATTCATAGAGACATAAAATCAAGTAATGTAATGTTGGATTCAAATTTCAATGCTAAGCTTGGAGACTTTGGATTAGCCAGGTTGTTAGAGCATGGAAAAGGGTCACAGACAACAGTTTTAGCTGGAACAATGGGATATTTGGCTCCTGAATCTGCCACCAGAGGCAAGGCTAGTAGAGGGTCAGATGTATACAGTTTTGGTATTGTTGCTTTGGAGATAGCCTGTGGAAGAAAACCAATTGAAGTAAAAGCCAGTGAAGAACAAGTCCTTATGGTGGAATGGGTTTGGAAACTTTATGGGATGGGTAATCTATTAGAAGCAGCTGATCCAAGATTGTGTGGAGAGTTTGATGAGCAGGAAATGGAAAGGTTAATGATAGTTGGGCTATGGTGTGCTCACCCAGATCACAATTTGAGGCCTACAATTAGGCAAGCAGTGCATGTACTTAACTCTGAAGCTCCATTGCCCAATCTACCATCAAATATGCCTGAACCCACCTACACTATTCCTTCATTTACTGTACCTGCACCTTCAACCTCTCCACCATCCTCTAGTGCTAATGCTTCTGGACTTGAACTTACTAAAGCAGAGCCTTCATCCAATAGCTCTTACAGTGGCTCCTCACAGTCCAATACATCTGCTGCACTTCTGCACATACTAACTTCAGTAAGTTGA 1536 0.4219 MVACQFCKCIHLLPYLDLTILILALIIPQAALLDFTFQQFHNNEDALNLVGDVYHDNGALQLTQSKKDSAGRVTYYKQLHLWDKDSGKLTDFTSKFSFIINQPYKAQFGDGITFFLASPNFPLPVPPDGAGIGLVGRQQMQDPNYTNEHPFVAVEFDTSPNDPFDPPYDHVGYKNNITVKQHYSHVVDLRDFLPEWFGLEVVNNGSFKSDSEVHRNEISRTKLVKVLIGWCHKKNDLLLIYEFMSNGSLDSHLYGGKSLLTWAARYNIAGGLASALLYLHEEWERCVIHRDIKSSNVMLDSNFNAKLGDFGLARLLEHGKGSQTTVLAGTMGYLAPESATRGKASRGSDVYSFGIVALEIACGRKPIEVKASEEQVLMVEWVWKLYGMGNLLEAADPRLCGEFDEQEMERLMIVGLWCAHPDHNLRPTIRQAVHVLNSEAPLPNLPSNMPEPTYTIPSFTVPAPSTSPPSSSANASGLELTKAEPSSNSSYSGSSQSNTSAALLHILTSVS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00130 511 PANTHER - 219 446 - -
Sebi31g00130 511 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Sebi31g00130 511 ProSiteProfiles Protein kinase domain profile. 121 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00130 511 MobiDBLite consensus disorder prediction 459 498 - -
Sebi31g00130 511 Pfam Legume lectin domain 33 182 IPR001220 GO:0030246
Sebi31g00130 511 SUPERFAMILY Protein kinase-like (PK-like) 224 467 IPR011009 -
Sebi31g00130 511 Pfam Protein kinase domain 221 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00130 511 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 197 IPR013320 -
Sebi31g00130 511 SMART serkin_6 173 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00130 511 Gene3D Transferase(Phosphotransferase) domain 1 244 457 - -
Sebi31g00130 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Sebi31g00130 511 Gene3D - 30 242 - -
Sebi31g00130 511 FunFam Lectin-domain containing receptor kinase A4.3 244 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00130 Sebi-Chr31 1409639 1411574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00130 214 454 Receptor kinase-like Gene Family AT5G10530 60.656 5.98e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi31g00130 Pkinase 3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00130 - - sot:102590494 450.669