Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00129 ATGGCGGCATGTCAATACTGTAAGTTTACCCATCTATTTCCTTATTTGGACTTAACCATAATAATTTTGGCTTTGATAATCCCTCAAGCTGTTCTGTTAGACTTCAGCTTTCAGCAATTTCATGACAAGGAAGATTCCTTGAATCTTATTGGAGATGTTTATTATGATAAGGGAGCTCTCCAACTCACCCAGTTTAAGAAAGATAGTGCTGGCAGGGTCACATATTACAAACAACTGCATCTTTGGGACAAGGACTCAAGAAAGCTCACTGACTTCACTTCCAATTTTTCCTTCATGATCAATCAACCAAACAAAACCCAACTTGGAGATGGCATCACATTCTTCCTTGCCAGCCCAAACTTTCCACTTCCTGTCCCTCCAGATGGAACTGGTATTGGCCTTGTAGGACGTCAACAAATGCAAGATCCAAATTATCCAAATGACCATCCATTTGTTGCAGTGGAATTTGACACTTTTCCAAATAGGTTTGATCCTCCATATGACCATATGAGAAGAGGGGAGGAAGATGACTTGGATCTTACTATGGACAATGATTTTGAAAAAGGGACTGGTCCTAAGAAGTTTTCCTATAATGAACTTGTTAGAGCAACTCACAGCTTTGCAAAGGAGCAGAAGCTTGGAGAAGGAGGTTTTGGGGAAGTTTACAAGGGATTTATAAGAGACTTGGATGACTATGTTGCAGTTAAAAGGATATCAAGAGGATCTAGACAGGGTGTGAAAGAGTATGTCTCTGAAGTAAAGATCATTAGTCAACTGAGGCATAGGAATTTGGTGCAGCTCATAGGATGGTGCAACAAGAAAAATGATCTTCTACTCATCTATGAGTTCATGTCAAATGGAAGCCTTGATTCCCATCTGTTTGGAGGCAAAAGCCTTCTGACATGGGGAGCAAGATATAACATTGCTGGAGGCCTAGCCTCAGCATTATTGTACCTACATGAAGAATGGGAGCAATGTGTGATTCATAGGGACATAAAATCAAGTAATGTAATGTTGGATTCAAATTTCAATGCTAAGCTTGGAGACTTCGGATTAGCCAGATTGTTGGATCATGACAAAGGGTCACAAACAACAGTTTTAGCTGGAACAATGGGATATTTGGCTCCTGAATCTGCCACCAGAGGCAAGGCTAGTAGAGAGTCTGATGTATACAGTTTTGGTATTGTTACTTTGGAGATAGCTTGCGGAAGAAAGCCAATTGAAGTAAAAGCCAGTGAAGAACAAGTCCTTATGGTGGAATGGGTTTGGAAACTTTATGGGATGGGTAATCTATTAGAAGCAGCTGATGCAAGACTGTGTGGAGAGTTTGATGAGCAAGAAATGGAAAGGTTAATGATAGTTGGGCTATGGTGTGCTCACCCAGATTACACTTTGAGGCCTACAATGAGGCAAGCAGTTCAAGTACTTTACTTTGAAGCTCTATTACCCATTCTCCCATCAAATATGCCAAAACCCACCTACACTATTCCTTCATTTACTGAATCTGCGCCTTCAAGTTCTTCATCGTCTAGTGTTTATGCTTTTAGACTTACTCAAACAGAGCCTTCATCCAGTAGCTCATCACAATCCAACGCATCTGCCGCACTTCTGCGTACATACTAA 1623 0.4085 MAACQYCKFTHLFPYLDLTIIILALIIPQAVLLDFSFQQFHDKEDSLNLIGDVYYDKGALQLTQFKKDSAGRVTYYKQLHLWDKDSRKLTDFTSNFSFMINQPNKTQLGDGITFFLASPNFPLPVPPDGTGIGLVGRQQMQDPNYPNDHPFVAVEFDTFPNRFDPPYDHMRRGEEDDLDLTMDNDFEKGTGPKKFSYNELVRATHSFAKEQKLGEGGFGEVYKGFIRDLDDYVAVKRISRGSRQGVKEYVSEVKIISQLRHRNLVQLIGWCNKKNDLLLIYEFMSNGSLDSHLFGGKSLLTWGARYNIAGGLASALLYLHEEWEQCVIHRDIKSSNVMLDSNFNAKLGDFGLARLLDHDKGSQTTVLAGTMGYLAPESATRGKASRESDVYSFGIVTLEIACGRKPIEVKASEEQVLMVEWVWKLYGMGNLLEAADARLCGEFDEQEMERLMIVGLWCAHPDYTLRPTMRQAVQVLYFEALLPILPSNMPKPTYTIPSFTESAPSSSSSSSVYAFRLTQTEPSSSSSSQSNASAALLRTY 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00129 540 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 170 IPR013320 -
Sebi31g00129 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Sebi31g00129 540 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Sebi31g00129 540 Pfam Protein kinase domain 208 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00129 540 SMART serkin_6 207 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00129 540 Gene3D - 31 172 - -
Sebi31g00129 540 CDD STKc_IRAK 213 476 - -
Sebi31g00129 540 ProSitePatterns Protein kinases ATP-binding region signature. 213 236 IPR017441 GO:0005524
Sebi31g00129 540 Pfam Legume lectin domain 33 170 IPR001220 GO:0030246
Sebi31g00129 540 Gene3D Transferase(Phosphotransferase) domain 1 284 494 - -
Sebi31g00129 540 PANTHER - 186 480 - -
Sebi31g00129 540 ProSiteProfiles Protein kinase domain profile. 207 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00129 540 FunFam Lectin-domain containing receptor kinase A4.3 284 496 - -
Sebi31g00129 540 MobiDBLite consensus disorder prediction 521 540 - -
Sebi31g00129 540 FunFam L-type lectin-domain containing receptor kinase IX.1 192 283 - -
Sebi31g00129 540 Gene3D Phosphorylase Kinase; domain 1 192 283 - -
Sebi31g00129 540 SUPERFAMILY Protein kinase-like (PK-like) 191 511 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00129 Sebi-Chr31 1404830 1406848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00129 171 494 Receptor kinase-like Gene Family AT5G10530 60.245 3.67e-140 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi31g00129 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00129 - - twl:119989435 550.051