Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00128 ATGGGCTCAAGAAAAAAACTCACTGACTTCTCTACCCAATTTTCCTTTGAAATTTTCTCAAATCAGACTAGTTTTGGAGATGGCTTGGCATTTTTCCTTGCAGATCCAGAGCTGCCACTTTTAAGGAGAATACAAGAAGGAGGTGGTCTTGGTTTGGTGGATGGTAACCAAGAATCAAACTCAACTAAACATTCATTTGTAGCAGTGGAGTTTGACACACACACAAATCCATGGGATCCACCAGGCACTCATGTAGGTATAAACTTGAACTCTATGACATCTCACAAAACTGTGCCATGGTTGGTTGATATTAGGCAAATGAAAGTTTATTATTGTAGAATTGAGTACAGTGCCAGTACTCATAATTTGGAAGTTACTTTCACTGGAAACAAAGCTGCTACAGGAGATAATTTTGAGATGAATACATTGTGGTCATGGTCATTCAATTCAAGCTTGCAAACTAATGAGACTGTATCAGATCAGATACCTCCAATGGCAGCCTCACCAATCCCAAATCCTAATCCATCACCACTTCCCAGTGCTAAAATTAGTCCTGAGAAAAAGAGCAAAAAAGGACTACTGGTAGGGCTAGGAGTTGGTTTAGGCATGGCTGCAATTTTCCTTATTTTAGGGTTGGTTTGTATTTTAATGTGGAAAAGGGCTAAAGGGAAAAAAGAAGATTCATTTTCTGACCTGAAAATGGATGATGAATTCCAAAAAGGCACTGGACCCAAGAGGTTTTGCTATAACCAATTGGTAAGTGCAACAAATAACTTTGCAGAAGCTCAAAAGATTGGACAAGGTGGATTTGGGGGTGTTTATAAAGGCTATTTGAAAGACTTGAACTCCTATGTTGCTATAAAGAGGATATCAAGAGAGTCTAGGCAGGGGATAAAGGAATATGCATCTGAAGTGAAAATCATTAGCCAACTGAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGCCATAGGAAGAAAGATCTCCTCCTCATATACGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATATCATGGAAAAAGCATCTTGACATGGCACATGAGGTACAACATTGCTATGGACTTGGCTTCAGCACTTTTGTATCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAACCCAGCAACATTATGTTGGACTCCAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGTTGGTGGATCATGAGAAAGGATCACAAACTACAGTTATAGCAGGGACAAGGGGCTACATAGCTCCTGAATATTTCACTACAGGGAAGGCTAAGAAAGAATCTGATATATACAGTTTTGGAATTGTTTCATTGGAGTTAGCCAGTGGAAGAAAACCAATTGACCTTAATGCCACTGAGGGTCAAATAACCATATTTGAGTGGGTTTGGGAGCTTTATAGATTAGGACGGTTCCTTGAAGCAGTGGACACAAAACTTGGGGAAGCATTTGATAAGGAACAGATGGAACGTTTAGTGGTTGTTGGTCTTTGGTGTGCCAATCCAGATTATTCATTCAGGCCATCTATAAGGCAAATGATTCAAGTGCTTAAACTTGAAGCTCCTTTACCAGTTCTCCCCCAGAAGATAACTGATCCAACTTACCATCCTCCAACAATGAGTTCAATCTTTGATTCAGTTTCTTCTCCCTCTCCCCGTTAG 1695 0.4012 MGSRKKLTDFSTQFSFEIFSNQTSFGDGLAFFLADPELPLLRRIQEGGGLGLVDGNQESNSTKHSFVAVEFDTHTNPWDPPGTHVGINLNSMTSHKTVPWLVDIRQMKVYYCRIEYSASTHNLEVTFTGNKAATGDNFEMNTLWSWSFNSSLQTNETVSDQIPPMAASPIPNPNPSPLPSAKISPEKKSKKGLLVGLGVGLGMAAIFLILGLVCILMWKRAKGKKEDSFSDLKMDDEFQKGTGPKRFCYNQLVSATNNFAEAQKIGQGGFGGVYKGYLKDLNSYVAIKRISRESRQGIKEYASEVKIISQLRHRNLVQLIGWCHRKKDLLLIYEFMQNGSLDSHLYHGKSILTWHMRYNIAMDLASALLYLHEEWEQCVLHRDIKPSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTVIAGTRGYIAPEYFTTGKAKKESDIYSFGIVSLELASGRKPIDLNATEGQITIFEWVWELYRLGRFLEAVDTKLGEAFDKEQMERLVVVGLWCANPDYSFRPSIRQMIQVLKLEAPLPVLPQKITDPTYHPPTMSSIFDSVSSPSPR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00128 564 ProSiteProfiles Protein kinase domain profile. 259 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00128 564 PANTHER - 9 532 - -
Sebi31g00128 564 MobiDBLite consensus disorder prediction 544 564 - -
Sebi31g00128 564 SUPERFAMILY Concanavalin A-like lectins/glucanases 5 155 IPR013320 -
Sebi31g00128 564 ProSitePatterns Protein kinases ATP-binding region signature. 265 288 IPR017441 GO:0005524
Sebi31g00128 564 MobiDBLite consensus disorder prediction 545 564 - -
Sebi31g00128 564 Gene3D Transferase(Phosphotransferase) domain 1 336 547 - -
Sebi31g00128 564 SUPERFAMILY Protein kinase-like (PK-like) 243 546 IPR011009 -
Sebi31g00128 564 Pfam Protein kinase domain 260 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00128 564 ProSitePatterns Legume lectins beta-chain signature. 67 73 IPR019825 -
Sebi31g00128 564 MobiDBLite consensus disorder prediction 165 184 - -
Sebi31g00128 564 Gene3D Phosphorylase Kinase; domain 1 244 335 - -
Sebi31g00128 564 Pfam Legume lectin domain 4 128 IPR001220 GO:0030246
Sebi31g00128 564 MobiDBLite consensus disorder prediction 166 180 - -
Sebi31g00128 564 CDD STKc_IRAK 265 529 - -
Sebi31g00128 564 FunFam L-type lectin-domain containing receptor kinase IX.1 244 335 - -
Sebi31g00128 564 SMART serkin_6 259 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00128 564 Gene3D - 2 162 - -
Sebi31g00128 564 CDD lectin_legume_LecRK_Arcelin_ConA 6 152 IPR001220 GO:0030246
Sebi31g00128 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Sebi31g00128 564 FunFam Lectin-domain containing receptor kinase A4.3 336 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00128 Sebi-Chr31 1402188 1403963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00128 6 547 Receptor kinase-like Gene Family AT5G10530 45.862 1.23e-165 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi31g00128 Pkinase 5.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00128 - - gmx:100814713 844.728