Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00099 ATGTCTACAAAAATGAAGTATACCACAAGAAATTTCAATGTTATCCAGATCTTGTGGGTATTGTTCTGTTTCTTTAAGGCTGGTTATGGTTCTGAAAGTGACATCTTATGCTTACAAACCATCAAGGATTCGATGAACCAATTCAATCATTTATCAAGCTGGGATTTGAACAGCAACACTGAAGGTTACATATGTAGATTTACTGGTGTTGAATGCTCGAATAATATGGAAGATAGAATAATCAGTCTCTGGCTTTCTAATATGGCGTTAGAGGGCCCTTTTCCTAGTTGCATTGAGAATTTCACATGGTTGCAGACTTTGAACCTCTCACACAACCAACTTTCTGGATATATCCCATCTGATATATCAAGTAAGTTGTCATATCTGACCTCACTTGATCTCTCTAATAACAAATTCTTTGGTGAAATTCCAGAGGGTATTTCCAACTTCCCTTACTTGAATACCCTTAGACTTGATGGCAACCAGTTAACTGGCCAAATCCCTCAAGAACTTGGGTTGCTTCCCCAGATTAAAGTTTTTAGTGTTGCTAACAACTTGTTAACAGGGCCAGTTCCTGTTTTTGTTAGCAATGTTGATGTGAGTTTGAGCTATGCCAATAATAGTGGACTCTGTGGAGGAACACTAGGAAGCTGTGATGAAAGCCTTTTTGATAGACCGTTTTGGTATAGTTTTATTATTGGTTTTGTTGCTTCAGCTATTTCTTTCATGTATTATTATGCACCTTGGACAGAATTCAAAAAAAGGAGGAGTAAAGCTATATATCCCTTAAGAAAGAAACAGAACCATCTAAAAGACACTAGACAAGTAGCTGATTTGCTACCACTGGCCTTGCAAGAACAAGGAAGCAAAGAGCTGTCAAGATTGTTGGAGAGATTAATTCCTACAATGAGCTTCATGGAACTATGCAAGGCAACTGATTGCTTTGGCACGGACAACATATTGGGGCTAGGAACAACAGGGATTATGTTCAAGGCCAAGTTACCAAATAACTGTTTTCTTGCAGTTAAGAGACTATATGATGGTGATAAGTACAAGAGGGAATTCTTGCTTGAAACAATGATTCCAGGGATACACAGGCAAAGAAACATAGCTCCTCTGGTTGGATTCTGCATAGAGAAAAATGAAAGGATTTTGGTGTATAAGTACATGTCAAATGGAAGACTCTGTGATTGGTTACATCCTGATGAAGGGCATCAAACTATGATATTGGAATGGCCTGAGAGGATTCACATTGCACTTGGGCTAGCAAGAGGTTTGTCTTGGCTCCATAAAAAGTGCAAGGTAGCACATCTCAATCTAGATTCAGAGTGTGTCTTGCTGGACAAGAATTTCGAACCAAAAATTTCCAATTTTGGCAATGCAAAATTCGTAAACCAGACGATTGAAGATCATGTAAGGATGAAATTGTTTTTGATTGATGGAGTTGGGCAGAAGGGCTGTGTTGAAAAGGATGTCTATGACTTTGGTATAATCCTTTTTGAGGTTATAACTGGGAAAAGATTAAGTCCAACGAGTGATTCTTCTGATGGTGTTGATGGCTCTTTGATGAACTACATTAGAAAAAACTTGTTCACTGATCCTATTGATTTTTATGATGCCGTTGATAAATCTATCATTGGTAAAGATTTTGATCATAAAATCCTTCGTCTCCTTGAAGTTGCATGCGACTGTGTAAAGCCTTCTTTAGAGAAAAGGCCAAAGATGGATGATGTTTACAAAACTATAAGAGCATTGTGGGAGGGTTATAGACCCTGGTTTGATTCTCAAAGGCTGAAACTATCTAAGGTTTGTCCTGATCAGATAACATACTGTAACGAAATAGAATGTATTTGTTGA 1857 0.3786 MSTKMKYTTRNFNVIQILWVLFCFFKAGYGSESDILCLQTIKDSMNQFNHLSSWDLNSNTEGYICRFTGVECSNNMEDRIISLWLSNMALEGPFPSCIENFTWLQTLNLSHNQLSGYIPSDISSKLSYLTSLDLSNNKFFGEIPEGISNFPYLNTLRLDGNQLTGQIPQELGLLPQIKVFSVANNLLTGPVPVFVSNVDVSLSYANNSGLCGGTLGSCDESLFDRPFWYSFIIGFVASAISFMYYYAPWTEFKKRRSKAIYPLRKKQNHLKDTRQVADLLPLALQEQGSKELSRLLERLIPTMSFMELCKATDCFGTDNILGLGTTGIMFKAKLPNNCFLAVKRLYDGDKYKREFLLETMIPGIHRQRNIAPLVGFCIEKNERILVYKYMSNGRLCDWLHPDEGHQTMILEWPERIHIALGLARGLSWLHKKCKVAHLNLDSECVLLDKNFEPKISNFGNAKFVNQTIEDHVRMKLFLIDGVGQKGCVEKDVYDFGIILFEVITGKRLSPTSDSSDGVDGSLMNYIRKNLFTDPIDFYDAVDKSIIGKDFDHKILRLLEVACDCVKPSLEKRPKMDDVYKTIRALWEGYRPWFDSQRLKLSKVCPDQITYCNEIECIC 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00099 618 Gene3D Transferase(Phosphotransferase) domain 1 390 592 - -
Sebi31g00099 618 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Sebi31g00099 618 SUPERFAMILY L domain-like 33 222 - -
Sebi31g00099 618 Gene3D Ribonuclease Inhibitor 32 218 IPR032675 -
Sebi31g00099 618 FunFam Nuclear pore complex protein NUP107 31 193 - -
Sebi31g00099 618 Gene3D Phosphorylase Kinase; domain 1 280 389 - -
Sebi31g00099 618 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 83 580 - -
Sebi31g00099 618 ProSiteProfiles Protein kinase domain profile. 315 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00099 618 Pfam Protein tyrosine and serine/threonine kinase 319 580 IPR001245 GO:0004672|GO:0006468
Sebi31g00099 618 SUPERFAMILY Protein kinase-like (PK-like) 293 588 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00099 Sebi-Chr31 1037427 1039480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00099 20 596 Receptor kinase-like Gene Family AT3G28450 33.111 7.63e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Sebi31g00099 Pkinase 3.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00099 - - gmx:106795644 959.903