Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00089 ATGGCGAATTCCAATTGGGTGTTCGATGATGATTATGGTTATCTAGACCTTGACCCACCCAATTTCTCTTGGTCCTCCTCTCCTCCTCCCACCCTCAGTGTGGAACTAGATGACTCGTATGCAAATTCGGATGGTTTCAAGGAAGCTGGCTCAAAAAAACGATTTGTGGAACTGGGTTCTATTCTGGACCCTGGGAGGCCTCCTAAAATGGACAAGGCTGTTATATTGAGTGATGCAGTTCGAGTGGTGTCTCAGCTACGAGAAGAGGCTCAAAAGCTCAAAGAGTCTACCGAGAATCTACAGGAGAAAATCAATGAATTGAAGGCTGAGAAAAATGAGCTTCGTGATGAGAAGCAGCGACTAAAAACAGAGAAAGATAACCTTGAGCAGAAGCTTAAAGCCTTGAATTCACAACCTAGCTTCTTGCACCAACCCCCCACCCTCTCAGCTGCGTTTCCTGCACCAGGACAAGTTGTTGGCAGCAAATTGGTGCCTTTCATGGGCTACCCAGGAGTTTCCATGTGGCAGTTTTTACCACCTGCTGCTGTTGATACCTCTCAGGACCATGTATTACGGCCCCCAGTTGCTTAA 591 0.4704 MANSNWVFDDDYGYLDLDPPNFSWSSSPPPTLSVELDDSYANSDGFKEAGSKKRFVELGSILDPGRPPKMDKAVILSDAVRVVSQLREEAQKLKESTENLQEKINELKAEKNELRDEKQRLKTEKDNLEQKLKALNSQPSFLHQPPTLSAAFPAPGQVVGSKLVPFMGYPGVSMWQFLPPAAVDTSQDHVLRPPVA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00089 196 PANTHER BHLH TRANSCRIPTION FACTOR 54 196 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Sebi31g00089 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 114 IPR036638 GO:0046983
Sebi31g00089 196 Coils Coil 76 138 - -
Sebi31g00089 196 Gene3D - 50 115 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00089 Sebi-Chr31 992339 994303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00089 3 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.585 2.21e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00089 - - ccaj:109814067 291.197