Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00067 ATGAGAGGTTCTACAATCCTTCAAATCTTCTGTTTTTGTACCTTCACTTTACCCGCGTTCTTTTCCGGTATTGTAGCATCCGTGAATACCTTAAATGCAACTCAATCTCTTAGAGTTAACCAAACCCTTGTATCTCCACAACAAGTATTTGAATTTGGCTTCTTTAATACAAGCATCTCGAGATGGTACTTGGGTATATGGTACAAGGACTTTCCTGACAAAACAGTGATTTGGGTGGCAAACAGAGACACCCCATTTGGAAATTCCAATGCAACTCTCAAGATTGGAGATAGGGGGAACCTGCTTCTTCTTAATCAAACAGATAACCCCATATGGTCATCAAATCAAACCACTGCTGTTACAAACCCAGTTCTTAAGCTTTTTGATAATGGGAATTTGATTCTCATGGAAGCAAACGAGAAAGACACCAACAACTATTTATGGCAGAGCTTTGATGATCCAACAGATACTTTGTTACCAGGCATGAAGCTTGGTTGGAACCTAGACACTGGTGTGGAGCGCCGCATAACATCATGGAGAGGCCAAGATGATCCATCAATAGGAGATTCTTATTTCACTCTAAATTACCATGGGATGCCAGATATTTTCTTATGGAACAAACAGCAAAGGGTGTTTAGAACTGGACCATGGAATGGTGAGAGGTTTGGTGGAGTACCAATACTAAACACAATTGCTGCTCTTAATGATAGTATAGTTGCTGATGAACATCAAGTGTATTACCTCCCTTCAATGCTCAATCAATCAAGCTTGTCCAGACTTGTTGTGAACTGGACAGGAACAATTGAACGTTTCCCAATGTGCCAGTGTATTCAAGGATTCAATGTCAAGAATCAGCGCCAATGGGATTTGAAAAACTTTTCTGATGGGTGTACTAGGAAGACAGAATTGGAATGTGGGAAAGACAAGTTCTTGAACATGACCAATGTGCAGCTTCCAGATGCCACAAAGGTGTTTGTGGACAAAAACATGACCCTATTGGAATGTAGAAATATGTGCCAGATGAATTGCTCTTGCACTGCCTATGCTAATGCAGAGATTACTAATGGTGGAACTGGTTGTGTGATGTGGACTGATAATCTCATAGACATGAGGCAGTTTTCTGAAGGTGGTCAAGATCTCTATATCAGATTAGCAGCTTCTCATGTAGATGACAATGGCACAGGATCTGTTGGTGGCTCTCACAAGAAAAAGAATTCAGGAAAGATTGCAGGAATTACAGTTGCTGTATCTATAGTAATTTTGGGGGTGATTATGTTCATTTTGTGGAAGAAGAGAATATTGAGCTGGAAAAAGAAGCAGAATGGTAATTCTGAAAGAGGCCAGGAGACGTTGCAACCTGAGGTAATAATACATGTAGATGAAAGGAACACGGATGACCTGGAGTTGCCATTGTTTGATTTTAATACCATAACACAAGCTACAAACTACTTCTCTTTAGCAAATAAACTTGGAGAAGGAGGCTTTGGAAGCGTTTACATGGGTAGGCTAGTGGATGGCCAAGAAATTGCTGTGAAAAGGTTATCAACAAGCTCTGGGCAAGGAAATGAAGAGTTCCTGAATGAGGTCAGATCCATTGCAAAGCTTCAACATCGGAATCTTGCATGGAGGCTATGGAAAGAAGGGAATGCATTGGAAATAATGGATTCGTCATTTGTTGATTCATATTCAGAATCTGAAGTTGTAAGATGCATACATGTTGCGTTCATATGTATCCAAGAACGAGCAGAAGACAGACCCACAATGTCTAATGTGGTGTTAATGTTGAGTAGTGAAACTGCATCAATGGCAGAGCCTAAACACCCTGGTTTCGTCCTCGGAAGGAGTTCCGGGGAAAGCGACTCTTCTTCGGCTAGGCAAGATGAATCATACTCATACACGATAAACCAAGTCACAGTTACAAGACTAGATGGCAGGTAG 1938 0.4097 MRGSTILQIFCFCTFTLPAFFSGIVASVNTLNATQSLRVNQTLVSPQQVFEFGFFNTSISRWYLGIWYKDFPDKTVIWVANRDTPFGNSNATLKIGDRGNLLLLNQTDNPIWSSNQTTAVTNPVLKLFDNGNLILMEANEKDTNNYLWQSFDDPTDTLLPGMKLGWNLDTGVERRITSWRGQDDPSIGDSYFTLNYHGMPDIFLWNKQQRVFRTGPWNGERFGGVPILNTIAALNDSIVADEHQVYYLPSMLNQSSLSRLVVNWTGTIERFPMCQCIQGFNVKNQRQWDLKNFSDGCTRKTELECGKDKFLNMTNVQLPDATKVFVDKNMTLLECRNMCQMNCSCTAYANAEITNGGTGCVMWTDNLIDMRQFSEGGQDLYIRLAASHVDDNGTGSVGGSHKKKNSGKIAGITVAVSIVILGVIMFILWKKRILSWKKKQNGNSERGQETLQPEVIIHVDERNTDDLELPLFDFNTITQATNYFSLANKLGEGGFGSVYMGRLVDGQEIAVKRLSTSSGQGNEEFLNEVRSIAKLQHRNLAWRLWKEGNALEIMDSSFVDSYSESEVVRCIHVAFICIQERAEDRPTMSNVVLMLSSETASMAEPKHPGFVLGRSSGESDSSSARQDESYSYTINQVTVTRLDGR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00067 645 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Sebi31g00067 645 Gene3D - 24 151 IPR036426 -
Sebi31g00067 645 SMART ntp_6 305 384 IPR003609 -
Sebi31g00067 645 Pfam Domain of unknown function (DUF3403) 597 645 IPR021820 GO:0004674
Sebi31g00067 645 Pfam Protein tyrosine and serine/threonine kinase 486 540 IPR001245 GO:0004672|GO:0006468
Sebi31g00067 645 Pfam D-mannose binding lectin 75 180 IPR001480 -
Sebi31g00067 645 CDD B_lectin 34 154 IPR001480 -
Sebi31g00067 645 SUPERFAMILY Protein kinase-like (PK-like) 469 541 IPR011009 -
Sebi31g00067 645 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Sebi31g00067 645 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 185 IPR036426 -
Sebi31g00067 645 MobiDBLite consensus disorder prediction 606 630 - -
Sebi31g00067 645 FunFam Receptor-like serine/threonine-protein kinase SD1-8 24 151 - -
Sebi31g00067 645 Gene3D Phosphorylase Kinase; domain 1 448 544 - -
Sebi31g00067 645 ProSiteProfiles PAN/Apple domain profile. 305 385 IPR003609 -
Sebi31g00067 645 Gene3D Hepatocyte Growth Factor 303 384 - -
Sebi31g00067 645 CDD PAN_AP_plant 301 385 - -
Sebi31g00067 645 ProSiteProfiles Protein kinase domain profile. 484 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00067 645 Pfam S-locus glycoprotein domain 212 271 IPR000858 GO:0048544
Sebi31g00067 645 MobiDBLite consensus disorder prediction 615 630 - -
Sebi31g00067 645 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 272 544 - -
Sebi31g00067 645 Pfam PAN-like domain 305 370 IPR003609 -
Sebi31g00067 645 SMART blect_4 34 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00067 Sebi-Chr31 777784 781061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00067 541 610 Receptor kinase-like Gene Family AT4G23190 47.143 2.37e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi31g00067 B_lectin 2.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00067 - - qsa:O6P43_031752 540.036