Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00066 ATGAAGCTGGGTTGGAACTTGGACACTGGCGTGGAGCGGCGTATAACATCATGGAAAAGCCAAGATGATCCATCCATAGGAGATACTTATTTCAGTCTAAATTATCATGGGATACCAGATGTTTTCTTATGGAACAAACAACAAAGGGTGTTTAGAACTGGATCATGGAATGGTGAGAGGTTTGGTGGAGTACCAATACTAAACACAATTGCTCCCCTTAATGACACTATAGTTGCTGATAAACATCAAGTGTATTACCTCCCTTCATCACTCAATCAGTCTAGCCTGTCCAGACTTATTGTGAACTGGACGGGAGTAATTGAAAGGTATGCATGGATAGAGAGTAGTCAGAGTTGGAGTAAAATATGGTCTGCACCTGATGGTGATTGTGATCATTATGGAGTGTGCGGTCCCTTTGGTATATGTGACTCAAATAGTTTCCCAGTATGCCAGTGTATTCAAGGGTTTAATGTCAAGAATCAGGGGCAATGGGATTTGAGAAATTTCTCTGATGGGTGTACTAGGAAGACAGAATTGGAATGTGGGAAAGACAAGTTTTTGCACAAGACAAATGTGCAGCTGCCAGATGCCACAAAGGTGTTTGTGGACAAAAACATGACCCTATTGGAATGTAGAAATATGTGCCAGATGAATTGTTCTTGCACTGCCTATGCTAATGCAGAGATTACTAATGGTGGGACTGGTTGCGTGATGTGGACTGATAATCTCATTGACATGAGGCAGTTTTCTGCAAATGGTCAAGATCTCTATGTCAAATTAGCAGCTTCTGATTTCAATTTCTTCTCAGATGACAGTGGCACAGGATCTCCTGGTGGGTCTGACAAGAAAAACAATGCAGGAATGATTGTAGGAATTGCAGTTACTGTAGCTATAGTAATTTTGGGAGTGATTATATTCATTTTGTGGAAGAAGAGAAAACTGCATAGTATATTGAGGTGGAATAAGAAGCAGGATGGTAATTCTGAGAGAGGTCAGAAGACACTGCTACCTGAGGTAATAATACATTCAATTAACAGAGAACACGCAGATGAAAGGAACATGGATGACCTGGAGCTACCATTGTTTGATTTTAATACCATAACACAAGCTACAAACTACTTCTCTCTAGCAAACAAACTTGGAGAAGGAGGCTTTGGAAGCGTTTACATGGGTAGGCTTGTGGATGGCCAAGAAATTGCTGTGAAAAGGCTATCAACAAGCTCTGGACAAGGAAATGAGGAGTTCAAGAATGAGGTCAGATCTATTGCAAAGCTTCAACATCGAAATCTTGTAAGACTGTTTGGTTGCTGCATTGAGAAAGAAGAGAAGATGTTGATCTATGAGTACATGGAAAATAAGAGCCTAGATTCTATTTTATTTGACACAGAAAAGAGTTCCATACTAGACTGGCCAATGCGCTTCAACATTATATGTGGAATAGCCAAGGGGCTTCTTTATCTACATCATGACTCAAGATTTAGAATTATCCATAGGGATCTCAAGGCAAGCAATATTCTTCTTGATAGAGAAATGAACCCAAAGATATCAGATTTTGGGATTGCTAGAATTTTTGACAGTGATCAAACACAAGCAAACACAAGGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCAATGGGTGGATTCTTTTCAGTGAAATCTGATGTTTTCAGTTTTGGAGTTCTAGTGTTAGAGATCATAAGTGGCAAGAAGAACAGAGGATTTTATTCCAATGATGACATAAATCTTCTTGGACATGCATGGAGGCTGTGGAAAGATGGGAGTGCATTGGAACTAATAGATCCATCATTTGGTGATTCATATTCAAAATCTGAAGTTGTAAGATGCATACATGTTGGTCTCATATGTGTCCAAGAACGGGCAGAAGACAGGCCAACAATGTCTACTGTGGCCTTGATGTTGAGCAGCGAAACTTCATCATTGCCAGAACCTAAACACCCTGGTTTTGTCCTTGGAAGGAGTTCCGAAGAAACCGATTCTTCTTCGGCTAAATCTCACACGATAAACCAAGTCACAGTTACAAGACTAGATGGCAGGTCAAACAACAAGGAAAAATCGAAACAATTTTCAAAGAATAGTGTACATGTCGCCTGTAACAGAATATGGTTTACAAACTCATCAAGATCAATTCAAGAGCCAATTGCAAAGCTGTTAGATTCTGGAAACTTAGTTTTGATGGATGGAAAGAACAATGATTCTTTTAGTTACATATGGCAAAGCTTTGATTATCCAACAGACACAATGTTACCAGGCATGAAGTTGGGTTGGGATAAGACCTCAGGTATGAACAGATATTTGACTTCATGGAAGAGTGCTAATGACCCCTCTCCTGGAAGCTTTACCTACAGCTTTGACCACAAAGAATTTCCTGAGTTGGTAATCCGCCAGAGAATGAATATCACATTCAGAAGTGGGATTTGGAATGGAATTCGTTTTAATTCAGATGATTGGACATCATTTACAGGAATTACAGCCTTCAGGCCTCAACTTTTAGTGACCAACAATGAGGTAGTATATTGGGATGAACCTGGAGATAGATTGTCAAGGTTTGTGTTGAAGGATGATGGACTGCTTGAAAGATATATATGGGACAACAAAGTTGTTCAGTGGATTGAAATGTATGAGGCAAGAAAAGACTTCTGTGATAATTATGGAGCATGTGGGAGTAATGGTGTTTGCAATATTAATGATGTGCCTGTTTACTGTGACTGTTTGAAAGGATTCAAACCTAAATCACAAGAAGAGTGGGATTCATTTAATCGGTCTAGTGGTTGCATAAGGAGAACACCGTTAAACTGCACTCAAGGTGACAGATTTCAGAAATTAAGCAGGGTGAAACTGCCCATGTTGTTGCAATTCTGGACAAACAATGGCATGAGTCTTGGAGAATGTGAAGTGGAATGCTTGAAAAACTGCTCTTGCACTGCCTATGCAAATTCTGCCATAAATGAAGGCCCCCATGGATGCTTGCTTTGGTTTGGGAATTTGATTGACATTAGGCTGCTTATAAGTAAAGAGGATGTACAACTGGATCTTTATGTAAGAATGAAAGAGGTAGGCTGA 3093 0.3977 MKLGWNLDTGVERRITSWKSQDDPSIGDTYFSLNYHGIPDVFLWNKQQRVFRTGSWNGERFGGVPILNTIAPLNDTIVADKHQVYYLPSSLNQSSLSRLIVNWTGVIERYAWIESSQSWSKIWSAPDGDCDHYGVCGPFGICDSNSFPVCQCIQGFNVKNQGQWDLRNFSDGCTRKTELECGKDKFLHKTNVQLPDATKVFVDKNMTLLECRNMCQMNCSCTAYANAEITNGGTGCVMWTDNLIDMRQFSANGQDLYVKLAASDFNFFSDDSGTGSPGGSDKKNNAGMIVGIAVTVAIVILGVIIFILWKKRKLHSILRWNKKQDGNSERGQKTLLPEVIIHSINREHADERNMDDLELPLFDFNTITQATNYFSLANKLGEGGFGSVYMGRLVDGQEIAVKRLSTSSGQGNEEFKNEVRSIAKLQHRNLVRLFGCCIEKEEKMLIYEYMENKSLDSILFDTEKSSILDWPMRFNIICGIAKGLLYLHHDSRFRIIHRDLKASNILLDREMNPKISDFGIARIFDSDQTQANTRRVVGTYGYMSPEYAMGGFFSVKSDVFSFGVLVLEIISGKKNRGFYSNDDINLLGHAWRLWKDGSALELIDPSFGDSYSKSEVVRCIHVGLICVQERAEDRPTMSTVALMLSSETSSLPEPKHPGFVLGRSSEETDSSSAKSHTINQVTVTRLDGRSNNKEKSKQFSKNSVHVACNRIWFTNSSRSIQEPIAKLLDSGNLVLMDGKNNDSFSYIWQSFDYPTDTMLPGMKLGWDKTSGMNRYLTSWKSANDPSPGSFTYSFDHKEFPELVIRQRMNITFRSGIWNGIRFNSDDWTSFTGITAFRPQLLVTNNEVVYWDEPGDRLSRFVLKDDGLLERYIWDNKVVQWIEMYEARKDFCDNYGACGSNGVCNINDVPVYCDCLKGFKPKSQEEWDSFNRSSGCIRRTPLNCTQGDRFQKLSRVKLPMLLQFWTNNGMSLGECEVECLKNCSCTAYANSAINEGPHGCLLWFGNLIDIRLLISKEDVQLDLYVRMKEVG 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00066 1030 ProSiteProfiles PAN/Apple domain profile. 943 1027 IPR003609 -
Sebi31g00066 1030 Pfam D-mannose binding lectin 709 780 IPR001480 -
Sebi31g00066 1030 Gene3D Phosphorylase Kinase; domain 1 338 449 - -
Sebi31g00066 1030 ProSiteProfiles Protein kinase domain profile. 374 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00066 1030 Pfam PAN-like domain 181 246 IPR003609 -
Sebi31g00066 1030 Pfam PAN-like domain 943 1009 IPR003609 -
Sebi31g00066 1030 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 635 - -
Sebi31g00066 1030 SMART ntp_6 944 1026 IPR003609 -
Sebi31g00066 1030 SMART ntp_6 181 260 IPR003609 -
Sebi31g00066 1030 Gene3D Transferase(Phosphotransferase) domain 1 450 654 - -
Sebi31g00066 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Sebi31g00066 1030 Gene3D Hepatocyte Growth Factor 180 261 - -
Sebi31g00066 1030 SMART serkin_6 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00066 1030 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 450 652 - -
Sebi31g00066 1030 Pfam Protein tyrosine and serine/threonine kinase 376 640 IPR001245 GO:0004672|GO:0006468
Sebi31g00066 1030 CDD PAN_AP_plant 177 261 - -
Sebi31g00066 1030 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Sebi31g00066 1030 SUPERFAMILY alpha-D-mannose-specific plant lectins 709 785 IPR036426 -
Sebi31g00066 1030 CDD PAN_AP_plant 939 1025 - -
Sebi31g00066 1030 ProSiteProfiles PAN/Apple domain profile. 181 261 IPR003609 -
Sebi31g00066 1030 Pfam S-locus glycoprotein domain 812 922 IPR000858 GO:0048544
Sebi31g00066 1030 Pfam S-locus glycoprotein domain 51 159 IPR000858 GO:0048544
Sebi31g00066 1030 CDD STKc_IRAK 380 644 - -
Sebi31g00066 1030 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 449 - -
Sebi31g00066 1030 Pfam Domain of unknown function (DUF3403) 646 689 IPR021820 GO:0004674
Sebi31g00066 1030 SUPERFAMILY Protein kinase-like (PK-like) 359 679 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00066 Sebi-Chr31 768141 774006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00066 277 659 Receptor kinase-like Gene Family AT4G23190 54.872 7.87e-137 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi31g00066 PK_Tyr_Ser-Thr 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00066 - - cave:132169979 1050.43