Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00065 ATGGATGACCTAGAGCTGCCAATGTTTGATTTTAATACCATAACATTGGCTACAAACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGCTTTGGTAGTGTTTACAGGGGCAGGTTGATGGAAGGCCAAGAAATTGCTGTCAAGAGGCTATCAAAAGACTCAGGTCAAGGAATTGAAGAATTCAAGAATGAGGTCAAGTTAATTGTCAAGCTTCAACACCGAAATCTTGTTCGGCTACTTGGTTGTTGTATTGAGAAGGATGAGAAGCTGTTGGTGTATGAGTACATGGAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAGGCAAAAAAACCCTTACTAGATTGGAAAACGCGTTTCAACATTATATGTGGAATTGCTAGAGGGCTTCTTTATCTACACCATGATTCGAGACTCAAAATTATACATAGGGATCTCAAGGCAAGCAACATTCTACTTGACTGTGAAATGAACCCAAAAATATCAGACTTTGGGATAGCTAGAATTTTTGGCACAAATCAAACAGAAGCAAATACTTTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAGTATGCTATGGATGGGAACTTCTCAGTGAAATCTGATGTTTTTAGCTTTGGGGTTATTATGTTAGAGATCATAAGTGGAAAGAAAAATAGAGGATTCTATTACTCAAACGATGATATGAATCTTCTAAGGAATGCATGGGGGCAGTGGAGAGAAGGAAGACCCTTGGATCTCATTGATTCATCAATTGGCGATTCATATTCACCATCTGAAGTAATTAGATGCATACATGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGTCTTCAGTGATCTTGATGTTAAGCAGTGAAACTGCATCAATGCCACAACCAAAAAGCCCTGGATTTTCGCTTGGAAAGAACCCCGGGGAGACAGATTCATCTTCAAGTAAGCAAGATAAATCATGGAGTGTGAACCAGGTCACAATCACATTGCTAGATGCTAGATAA 1023 0.392 MDDLELPMFDFNTITLATNNFSEANKLGQGGFGSVYRGRLMEGQEIAVKRLSKDSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKLLVYEYMENRSLDSILFDKAKKPLLDWKTRFNIICGIARGLLYLHHDSRLKIIHRDLKASNILLDCEMNPKISDFGIARIFGTNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVIMLEIISGKKNRGFYYSNDDMNLLRNAWGQWREGRPLDLIDSSIGDSYSPSEVIRCIHVGLLCVQERAEDRPTMSSVILMLSSETASMPQPKSPGFSLGKNPGETDSSSSKQDKSWSVNQVTITLLDAR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00065 340 ProSitePatterns Protein kinases ATP-binding region signature. 27 49 IPR017441 GO:0005524
Sebi31g00065 340 ProSiteProfiles Protein kinase domain profile. 21 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00065 340 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 97 300 - -
Sebi31g00065 340 Gene3D Transferase(Phosphotransferase) domain 1 97 303 - -
Sebi31g00065 340 Gene3D Phosphorylase Kinase; domain 1 2 96 - -
Sebi31g00065 340 Pfam Protein tyrosine and serine/threonine kinase 24 289 IPR001245 GO:0004672|GO:0006468
Sebi31g00065 340 PIRSF ILK 11 304 - -
Sebi31g00065 340 SMART serkin_6 21 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00065 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Sebi31g00065 340 MobiDBLite consensus disorder prediction 297 327 - -
Sebi31g00065 340 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 96 - -
Sebi31g00065 340 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 340 - -
Sebi31g00065 340 Pfam Domain of unknown function (DUF3403) 294 340 IPR021820 GO:0004674
Sebi31g00065 340 SUPERFAMILY Protein kinase-like (PK-like) 6 307 IPR011009 -
Sebi31g00065 340 CDD STKc_IRAK 27 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00065 Sebi-Chr31 746046 763065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00065 9 340 Receptor kinase-like Gene Family AT4G11530 59.644 3.59e-143 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi31g00065 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00065 - - gmx:100797331 610.527