Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00059 ATGTATAGCTCTGCTACTGCCAGGGATACCATTACATCGTCTCAATTCATCAGAGACTCAGAGACAGTAAACTCAAGTGACAGTGTCTTCAAACTTGGATTTTTCAGCCCTGCAAATTCAACAAACCGTTACTTAGGAATCTGGTATCTCTCTGACTCCAACGTCATATGGATAGCTAATAGAGACCAACCACTCAAAGACTCTTCTGGGGTTTTGAAGATCTCTGAAGATGTCCTGCAAGATGGAACCAGTGGACAGACCATATGGGAGAGTTTCAAACATCCTTGTGATGCAGCAGTGCCAACGATGAGAATCAGTGCTAACAGAGTCACGGGTCAGAAAATAAGGTTTATATCAAGGAAAAGTGATTCTGATCCTTCTACTGGGTACTTCTCTGCTAGTCTTGAACGTCTGGATGCACCAGAAGTGTTTTTCTGGATCAATGGAACTCGCCCATATTGGAGGACTGGTCCATGGAATGGTCGAATCTTCATTGGGACACCTCTGATGTCAACTGGGTATCTATATGGATGGAATGTGGGATATGAAGGGAATGAAACTGTTTATCTAACTTACAGTTTTGCTGACCAATCTGCATTTGGAATCCTTACCTTGAATCCACAAGGTAAACTTAAATTGAGCTCACCAATCTGTACCTGTTTGAGAGGGTATGAACCCAGGAATCCAGAGGAGTGGAAAAGGCAAAATTGGACTAGTGGGTGTGTGAGGAAGGAACCACTGAAGTGTGAGAGGTTGAAAAATGGAAGTGAAACTAGCCAAGAAGATCAATTTTTGAAGCTTCAAATGATGAAAGTTCCAGACTTTGCAGAGAGGTTAGATGTTGAGGAAGGCCAATGTGAACCCATGTGCTTGAAGAATTGCTCTTGTTTGGCATATGCATATGATGCTGGCATTGGTTGCTTGTATTGGAGTGGACCTTTAATTGACTTACAACAATTCACAAGTGCAGGAATTGATCTTTACATCCGTTTAGCCCATTCAGAATTTCAATTCAGTAATGCAACTAACCATACTAATAAAAGAACAAACAAGGGCTTAATCATTGGAATTACAGTGGCTGCTGGAACCATTATCTTGGCCACCTGTGCATATCTTGCCATTTGTACACATCACTCGCGGAAAGGAGCTGCTAAACATTCAGAAGTGGTTGCAATTGCTACAAACAACTTTCACACAGCTAATGTGCTTGGAAAGGGCGGTTTTGGTCCAGTGTATAAGGGACTATTGCCAGATGGTCAGGAAATTGCAGTGAAAAGACTCTCCAGAACATCTGGACAAGAGATGAATCCAAAAATATCTGACTTTGGTTTGGCTAGAATACATAAAGGTGAAGATGAGGTTAATACCAAAAGGGTTGTTGGCACATATGGCTATATGTCCCCTGAATATGCAATGGAAGGATTGTTTTCTGAGAAATCAGATGTCTACAGTTTTGGAGTTTTGTTACTAGAAATTGTTAGTGGAAAAAGAAACACTAGCTTTCGTAATGATGAACAATCTCTCAGTCTCGTAGGATTTGCGTGGAATCTATGGAACGAAGACAAGATAAGGTCTATGATAGATCCAGATTTATCAGCTTCAGGTTCTGAGAATCATATTTTGAGGTGCATCCACATAGCATTTCTATGTGTGCAAGAAGTTGCAAAATCTAGACCAACTATGACTACTGTAGTCTTGATGCTTAATAGTGAGATTTCCCATCTCCCTCCTCCTAAGCAAGTTGCATTTGTGCAGAAGCATTATTCATCAAGTTTTGAGTCTTCTTCTCGGGAAAATCAGTGCAACTCCAATAATGTAACTCTTACTGAGATGCAAGGCAGATAA 1845 0.4087 MYSSATARDTITSSQFIRDSETVNSSDSVFKLGFFSPANSTNRYLGIWYLSDSNVIWIANRDQPLKDSSGVLKISEDVLQDGTSGQTIWESFKHPCDAAVPTMRISANRVTGQKIRFISRKSDSDPSTGYFSASLERLDAPEVFFWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWNVGYEGNETVYLTYSFADQSAFGILTLNPQGKLKLSSPICTCLRGYEPRNPEEWKRQNWTSGCVRKEPLKCERLKNGSETSQEDQFLKLQMMKVPDFAERLDVEEGQCEPMCLKNCSCLAYAYDAGIGCLYWSGPLIDLQQFTSAGIDLYIRLAHSEFQFSNATNHTNKRTNKGLIIGITVAAGTIILATCAYLAICTHHSRKGAAKHSEVVAIATNNFHTANVLGKGGFGPVYKGLLPDGQEIAVKRLSRTSGQEMNPKISDFGLARIHKGEDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIVSGKRNTSFRNDEQSLSLVGFAWNLWNEDKIRSMIDPDLSASGSENHILRCIHIAFLCVQEVAKSRPTMTTVVLMLNSEISHLPPPKQVAFVQKHYSSSFESSSRENQCNSNNVTLTEMQGR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00059 614 CDD PAN_AP_plant 246 332 - -
Sebi31g00059 614 Gene3D Phosphorylase Kinase; domain 1 376 435 - -
Sebi31g00059 614 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 448 573 - -
Sebi31g00059 614 ProSiteProfiles PAN/Apple domain profile. 249 332 IPR003609 -
Sebi31g00059 614 MobiDBLite consensus disorder prediction 594 614 - -
Sebi31g00059 614 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 559 - -
Sebi31g00059 614 Pfam S-locus glycoprotein domain 154 213 IPR000858 GO:0048544
Sebi31g00059 614 SUPERFAMILY alpha-D-mannose-specific plant lectins 45 161 IPR036426 -
Sebi31g00059 614 ProSiteProfiles Bulb-type lectin domain profile. 8 129 IPR001480 -
Sebi31g00059 614 Gene3D - 2 157 IPR036426 -
Sebi31g00059 614 ProSiteProfiles Protein kinase domain profile. 189 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00059 614 Gene3D Transferase(Phosphotransferase) domain 1 436 605 - -
Sebi31g00059 614 Pfam PAN-like domain 258 317 IPR003609 -
Sebi31g00059 614 CDD B_lectin 14 91 IPR001480 -
Sebi31g00059 614 SUPERFAMILY Protein kinase-like (PK-like) 388 597 IPR011009 -
Sebi31g00059 614 Pfam Protein tyrosine and serine/threonine kinase 436 566 IPR001245 GO:0004672|GO:0006468
Sebi31g00059 614 SMART blect_4 14 95 IPR001480 -
Sebi31g00059 614 SMART ntp_6 259 331 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00059 Sebi-Chr31 691044 694759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00059 388 583 Receptor kinase-like Gene Family AT4G23280 42.510 8.55e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi31g00059 PK_Tyr_Ser-Thr 7.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00059 - - gmx:112998788 671.003