Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00038 ATGGGTGATGAACAACGAGAAGCCACCGTCAAGCTCATCTCTTCCTTGATCTCCCTCTCTCACTCGATTAGGGTCTTCGCTGGAAAATGGCAACTGATACGGAACAAGCTGGAGGAGCTTCATTCGGGACTAACCGCCGGCGAGAACCAGTCACTCTCCGGCGTGTTCCCGGCGATAGCTGCCACCGTGGAGGAGTGCCACGAGCTGGCTCGGCGTTGCGTGGATCTGTCGTACAGCGGGAAGCTGCTGATGCAGAGCGATTTGGACGTGACGTTGGGGAAGTTGGAGGGGCATGTGAAGAAGCTCTCTGAGATATACAAGAAGGGTATTCTCTCAAATGGGTATGCTGTGGTTGTTTCAAGGCCTTGCCTTGGTGCTTCCAAAGACGACATGAGGTTCTACCTCAGGGACTTGCTCACTAGGATCAAAGTGGGTGATTTCGGTATGAAGAAGCAGGCTTTGATCAACCTGCATGAGGTTGTTCTCCAAGATGACAAGTATGTCATGTTGATTCTGCAAGTTACTGACTTTGTTCATGTGTTGGTGGATTTTCTGGGTTCCCCTGAGATTGAGATTCAGGAGGAATCTGCCAAGGTGGTTTCTGTCATTGTGGGGTTTGATTCTTGTAAAGGGGTTTTAATTGCTGCTGGGGTTATTGCTCCCTTGATTCGGGTTTTGGAATGTGGGAGTGAATTGGGGAAGGTTGGTGCTGCTAGGTGTTTGCACACGTTGACTGAGAATTCGGATAATGCTTGGTCTGTTTCAGCGCATGGGGGTGTCACCGCCTTGTTGAAGATTTGTGAAAGTTCGGATTCTAAAGGGGAATTGATTGGTCCTATTTGTGGGGTGTTGAGGAATCTTGCTGGTGTTGAAGAAATAAGAGGTTTATGGTTGAGGAGGGTGGTGATTAGGGATGGTGGAATTCGTGTCTTCTTACGTGTTTTGGATCCTAAATGGACGTGTTCATCTAAAACCAGAGAGGTGGTGATGAGGGCTGTTGAAAATTTGTATTTTCTTCACCTGGTTCTAAATGGGGAGGTTTCAATTCAAGAGTTGGTGCTTAAAGTGGCATTTAGACTGTGTGGAACTTCAGAGGAGGCTAAGAAAGCGTTGGGTGATGCAGGCTTCATGGCAGAGCTTGTTAAGTTTCTAAATGCAAAATCATTTGAAGTTCGTGAAATGGCAGCTGAGACACTATCTGGCATGGTTATGGTGCCAAAAAAATAG 1227 0.4743 MGDEQREATVKLISSLISLSHSIRVFAGKWQLIRNKLEELHSGLTAGENQSLSGVFPAIAATVEECHELARRCVDLSYSGKLLMQSDLDVTLGKLEGHVKKLSEIYKKGILSNGYAVVVSRPCLGASKDDMRFYLRDLLTRIKVGDFGMKKQALINLHEVVLQDDKYVMLILQVTDFVHVLVDFLGSPEIEIQEESAKVVSVIVGFDSCKGVLIAAGVIAPLIRVLECGSELGKVGAARCLHTLTENSDNAWSVSAHGGVTALLKICESSDSKGELIGPICGVLRNLAGVEEIRGLWLRRVVIRDGGIRVFLRVLDPKWTCSSKTREVVMRAVENLYFLHLVLNGEVSIQELVLKVAFRLCGTSEEAKKALGDAGFMAELVKFLNAKSFEVREMAAETLSGMVMVPKK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00038 408 SUPERFAMILY ARM repeat 136 403 IPR016024 -
Sebi31g00038 408 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 258 288 IPR000225 GO:0005515
Sebi31g00038 408 SMART arm_5 294 338 IPR000225 GO:0005515
Sebi31g00038 408 SMART arm_5 364 404 IPR000225 GO:0005515
Sebi31g00038 408 SMART arm_5 164 205 IPR000225 GO:0005515
Sebi31g00038 408 SMART arm_5 247 289 IPR000225 GO:0005515
Sebi31g00038 408 SMART arm_5 206 246 IPR000225 GO:0005515
Sebi31g00038 408 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 298 407 - -
Sebi31g00038 408 Gene3D - 124 407 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00038 Sebi-Chr31 529355 530743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00038 118 317 U-box Gene Family AT2G23140 21.782 1.83e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00038 - - gmx:100783537 581.637