Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00037 ATGAACAATAATTTGAATGGGACAGAAGAATTTGCCGTGGACTATGACTACCTAATTATCGCCGTGGGCGCTAATGTCAATACATTTAATACACCAGGAGTGGTGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCTCAGAAGATTAGAAGAACAGTTATTGACTGCTTTGAGAGAGCTAATTTGCCCGATGTAAATGAAGAAGAGAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCAACTGGAGTGGAGTTTGCAGCCTCACTTCATGACTTTGTCAATGAGGATTTGGTCCGTTTATATCCCGGGATAAAAGATTTAGTTCAAATTACACTTCTGGAGGCCGGAGATCATATCTTGAGCATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGACAAGTTTGGAAGAGATGGGATTGTTGTGAAAACAGGATCCATGGTTATGAAGGTAGATGAGAAGGAAATTTCCACTAAAGAACTGAAAAATGGAGGAGAGATTACTAAAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTTATGACACAAATTGGTCAGACTAGCAGGCGTGCTCTAGCTACTGATGAATGGTTGAGAGTTAAGGGATGCAACAATGTGTATGCTCTGGGAAGATATTACAGCGCGATCTTTAAGACTGACAAAGACCATTCTGGAACACTTACTGTCAAAGAATTTCAAGAGGTGATGGATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTGAAGAGTAAACAGATGCGTGACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGTTAAAAAGGAATCAATTGAACTTAATATCGAAGAACTCAAAGCAGCACTTTCCAAAGTGGATTCTCAGATGAATTTCTTCCTGCTACAGCGCAGGCACTTACCTGGCCAAGTGTTTAACCGGATGGACGAGTGTGAAAAAAGTCCTGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGTCATCGTTTCAAACCCTTCAGGTACAAGCACTTGGGTCAATTCGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGGGATTGGGTTTCAATTGGCCACAGCTCATGGCTGTGGTATTCTGTGTATGCGAGCAAGCAAGTAAGCTGGCGTACAAGGGCGTTAGTAGTTACAGACTGGACAAGACGTTTTATTTTTGGGAGGGACTCAAGTCGCATTTGA 1251 0.4253 MNNNLNGTEEFAVDYDYLIIAVGANVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPDVNEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVQITLLEAGDHILSMFDKRITAFAEDKFGRDGIVVKTGSMVMKVDEKEISTKELKNGGEITKIPYGMAVWSTGIGTRPFIKDFMTQIGQTSRRALATDEWLRVKGCNNVYALGRYYSAIFKTDKDHSGTLTVKEFQEVMDDICERYPQVELYLKSKQMRDIADLLKEAKGDVKKESIELNIEELKAALSKVDSQMNFFLLQRRHLPGQVFNRMDECEKSPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSWLWYSVYASKQVSWRTRALVVTDWTRRFIFGRDSSRI 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00037 416 ProSitePatterns EF-hand calcium-binding domain. 234 246 IPR018247 -
Sebi31g00037 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 76 94 - -
Sebi31g00037 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 15 33 - -
Sebi31g00037 416 ProSiteProfiles EF-hand calcium-binding domain profile. 234 256 IPR002048 GO:0005509
Sebi31g00037 416 PANTHER NADH DEHYDROGENASE 8 416 IPR045024 GO:0003954|GO:0006116
Sebi31g00037 416 SUPERFAMILY FAD/NAD(P)-binding domain 11 184 IPR036188 -
Sebi31g00037 416 Coils Coil 285 305 - -
Sebi31g00037 416 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 224 IPR023753 GO:0016491
Sebi31g00037 416 Gene3D - 1 269 - -
Sebi31g00037 416 Gene3D - 297 415 - -
Sebi31g00037 416 SUPERFAMILY EF-hand 169 305 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00037 Sebi-Chr31 522284 524878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00037 4 416 Chloroplast and Mitochondria Gene Families AT4G21490 70.208 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00037 K03885 - gmx:100802661 714.146