LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi31g00033	ATGCAAACGAGGTATATGGAGAGATCGAGCAGTATGGCGAGGGAGAAGCGAAGCTTAGATTCAAGTACAAGTGAGGAAGACCAGCCTGAAAGGAAGCGACCTGCCTTGGCTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGCCCTGCCAAGCTTAGTGGGAGGTCTTCTCCCAAGCGCATAGAAGGCCCTGATGGCAACAATTTACAATTACAATTCAAGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGAGAGCAGGGCACTGCCATACATATTGTTTTAATTGATGCAAACACCGGCCATGTTGTCACATCTGGCCCAGCATCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATAGTTGGAGTGAAGGAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAAAGACCTCTCCTCACTGGTGATCTGCAAGTGACACTAAAGGAGGGTGTTGGAACACTGGGTGATCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCCGGCTGGGGCTCAAAGTTTCCTCAGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGAGGAGAATTATACAAGAAACACTACCCACCAGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCCTTTCACAAAAGGCTAACTAAAGCAGGAATATATACTGTTGAAGATGTCCTACGACTTGTGGTGAGAGACCCACAGAGACTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGCGGAAAACTCTATGTATACTACCCTGATGATGCAAGGAATATTGGTGTTGTGTTCAATAACATTTATGAGTTGAGTGGCTTAATCACCAATGAACAATATTACTCTGCTGATTCTCTCTCTGACAGTCAAAGGGTTTATGTGGACACTTTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATTACAATCAGAATAAGACTTTGACCACCTCCCAACCTCAGGCTCCAGTGGGTTCCCATAATTATTCAAACTCACTTGATCAGCAGATCTCCATCCCAATTCTACCAGTTCCTGTACACACAGGGCAAGCTTCAATGGATCCTGGAGTATCAGTTGGAGGTTATCACGATGGTACGAATACCAGATTCTCAATGCAACCACAGAATGCTAATCTTAATTCTTCTATTCAGTTTGATAATACTGCATTCCCACTACAAAACCAACTGATAAGTGCTTCACACCAATCTCAACTTCCAAGAAATGAGAATGAGCTGACTCTTGGTCCACCACAACCAGCCACTCCTGGTTTTCAGACTGTCAGCTATTCAAATCCTACTTATAGAGGATTTGAAGATTTCTTCCCAGAAGAAGAGATTCGTATTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGAATTTTTAATATGGGAGGGCAATCTCATGCTCCCTTTAATGCTCCTGAAGATGGATACCCTTATTCATCTGCTTACATGCCTGCAACTTCCACGAACTACAACTTAGATGATGAGCGAAGCCGTTCCTCAGGTAAGGCTGTTGTTGGGTGGCTCAAGCTTAAGGCAGCTCTGAGATGGGGCATTTTTATTCGGAAGAAGGCTGCTGAGAGACGGGCACAACTTGTTGAGCTGGATGACTCATAG	1818	0.4417	MQTRYMERSSSMAREKRSLDSSTSEEDQPERKRPALASEEVERALAKLGPAKLSGRSSPKRIEGPDGNNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPASCVKLDVIVLEGDFNNEDDDSWSEGEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLTKAGIYTVEDVLRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNIGVVFNNIYELSGLITNEQYYSADSLSDSQRVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNKTLTTSQPQAPVGSHNYSNSLDQQISIPILPVPVHTGQASMDPGVSVGGYHDGTNTRFSMQPQNANLNSSIQFDNTAFPLQNQLISASHQSQLPRNENELTLGPPQPATPGFQTVSYSNPTYRGFEDFFPEEEIRIRSHEMLENEDMQHLLRIFNMGGQSHAPFNAPEDGYPYSSAYMPATSTNYNLDDERSRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS	605

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi31g00033	605	MobiDBLite	consensus disorder prediction	1	69	-	-
	Sebi31g00033	605	Pfam	Calmodulin binding protein C-terminal domain	300	362	IPR046829	-
	Sebi31g00033	605	PANTHER	OS02G0177800 PROTEIN	36	520	IPR012416	GO:0005516
	Sebi31g00033	605	Pfam	Calmodulin binding protein-like N-terminal domain	70	217	IPR046831	-
	Sebi31g00033	605	Pfam	Calmodulin binding protein central domain	229	295	IPR046830	-
	Sebi31g00033	605	MobiDBLite	consensus disorder prediction	9	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi31g00033	Sebi-Chr31	475937	480103	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi31g00033	9	600	Calmodulin-binding Proteins	AT5G57580	59.042	0.0	724

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi31g00033	-		-	gmx:100802994	1044.26