Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00027 ATGGCGGCCATTAACATTGTTGGGGCAATCACGAGTGTTATGAGCTGCCTCTGTGCGCAGAACTGTCTCCATGAATCACTTGGCCATCAGATTAGGCACCTTAGAAGGCCTAAAAGGAACTCAGACAAGCTGAAGTCATTGAAGGAGGAGCTAGAAGCCCGGAAAGTGGACGTGAGCACCAAGTTAAATCAAATGTGGCTTCAAAAAGGGATGAATCCAAAGAGAACAGTAGAGCTGTGGCTGAAAAATGTTGATAAGATTGCAAGTGAAGTAAATACTCTTATAATGAACACTGAACAAGAAAGTGGAAGCCCAGGATTTCAGGATGAGACTACAAGAGCTGCTGCATTGTTTGAAGCTTTCAAAAGAAGGAGCAGATTTGCCTTGATTCTAGATGACCTGTGGGAACCATTCTCTCTTGAAAGAGTTGGAATACCCATACCAACCATAGAGAATGGTTGTAAATTACTAATAACTACTCGAAGGTTAAGTGTTTGCCGAGGCATGGAAACAGATCAGGATGTAAAAGTGAAGGTTCTTACAGAAAATGAAGCATGGAATCTCTTCAGGGACAAAGTTGGAGAAGCAGCATTGGCTTCTCCAGATATACAACAAATTGCAAAACTTGTGGCAAAAGAATGTACTGTGGATAGGATATCAGCAAGCAGACAGAAGGGAAATTTTATTTTGAATGAATTGAAATATGCATGCTTGTTGGAAAGTGCCGCAGAAAATGTGAAGGAATGTGTCAAAATGCATGACTTAATACGAGATATGGCCATTACAATCATGAGAACAGATCCTAATTGGCACTGCATTGTCAAAGCTGGTAGTGGACTCACAAAACCTCCACATATTGATGAATGGGTGGAAGATGTTCAAAGGGTGTCACTGATGAAAAATGACTTGAAAAATATCTTTCTTGGCAATCCTCCACCATGTCCAGGTGTGACTTCCTTGTTATTGCAATACAACTCTTTCCCTCAAAACCTACCATATGACTTCTTTGATTCCATGCCCAGCCTAAAGGTTCTTGATGTCTCTTACACCGGCATTGATTCCCTGCCTGGATCATTTTCTAACTTGGTGAACCTATGTGCCTTGTTAGTCAGCAATTGCTGGAACTTAAGAGCAATCCCTTCTTTAGCAAAACTCATCAAGTTAATGGCTTTAGACCTTCCTTGTTCCAGAAACATCAAAGAACTACCACAGGGAACAGAACAGTTAGGCAATCTGAGAAGGCTGAATATTTCCAACACCATGATTAAAACCTTACCATCTGGTCTGCTGTCAGCATTAACTCTTTTGGAAGAGTTATTGGCATCTAATGCTCTAGTCTTTCAAATACCACTGCCACCAACCAGTTGTGAAATCAGTATTGATGAAATCATCTCCTCCTCCAGTTTATCTTCTCTTGAAGTTGATTTCTGGTATTTTGACCTTTATGATTTATATACTAGATCTGGTCACTGGGTTCAGCTAGATAAGTTCAAGTTTAATGTTGGACCTGGAGAGCTTCAACAAGTTTCAGAGAAAAGGAGTGTGGAATTTCTTGGGATATCCATTGCAAAAGGACTTCTGATCCCAACAAATACTACTGAGTTGAAGTTCATTGATTGTCATGATGTTACAGAGCTAACTACTTGTCTGATGCATGTTGAGAAGCTTAAAAAGTGTACAATAGTATGCTGCTACAGTGTAGAATACATTGTTGAACCTGGGAGGAATGATTTGTCTATGCTGGAGACATTGGTGCTGAGATTTTTAATCAATTTGCAGATGATATGCAGGGAAGTGGTGACACCATCTACACTAATGAGCCTGAAGATAATCAATGTGGAATTTTGTCCAAATTTGAAGAATCTATTCTCAGGGAACCTCTTGCTCCAACTATTGGATCTTGAAGAAATTAGAGTCAGCCACTGTAACAGTATGGAGGACTTGATGAGATGGGAAGGAGGAAGCAATAATATTTATGCTGCTAAAATCCTCTTGCCAAAATTACAGAAACTGAGATTGGAATCTATGCCTAAATTAAAGGAGATATATAGTGGATTCATCAGTTTTGGCTCTCTATGTTCTGTTCATGTCATTTCTTGTGATGCTTTGAAGAGGCTACCCTTTGAGCTAGATGATGCAGTAGGCCTTCAACAACAACAATTGGTAGCACCTGGTTTGGAAATAAGAGGAACAAAATATTGGTGGGAGTCACTTGAGTGGGATGAACCTGCTGGCTGCTGCCAAACAAATGATGGAAGCTTGTTTCTTAGAGCTGCCAATGGTGTCAGATCAAGTTGGTAG 2301 0.4024 MAAINIVGAITSVMSCLCAQNCLHESLGHQIRHLRRPKRNSDKLKSLKEELEARKVDVSTKLNQMWLQKGMNPKRTVELWLKNVDKIASEVNTLIMNTEQESGSPGFQDETTRAAALFEAFKRRSRFALILDDLWEPFSLERVGIPIPTIENGCKLLITTRRLSVCRGMETDQDVKVKVLTENEAWNLFRDKVGEAALASPDIQQIAKLVAKECTVDRISASRQKGNFILNELKYACLLESAAENVKECVKMHDLIRDMAITIMRTDPNWHCIVKAGSGLTKPPHIDEWVEDVQRVSLMKNDLKNIFLGNPPPCPGVTSLLLQYNSFPQNLPYDFFDSMPSLKVLDVSYTGIDSLPGSFSNLVNLCALLVSNCWNLRAIPSLAKLIKLMALDLPCSRNIKELPQGTEQLGNLRRLNISNTMIKTLPSGLLSALTLLEELLASNALVFQIPLPPTSCEISIDEIISSSSLSSLEVDFWYFDLYDLYTRSGHWVQLDKFKFNVGPGELQQVSEKRSVEFLGISIAKGLLIPTNTTELKFIDCHDVTELTTCLMHVEKLKKCTIVCCYSVEYIVEPGRNDLSMLETLVLRFLINLQMICREVVTPSTLMSLKIINVEFCPNLKNLFSGNLLLQLLDLEEIRVSHCNSMEDLMRWEGGSNNIYAAKILLPKLQKLRLESMPKLKEIYSGFISFGSLCSVHVISCDALKRLPFELDDAVGLQQQQLVAPGLEIRGTKYWWESLEWDEPAGCCQTNDGSLFLRAANGVRSSW 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00027 766 SMART LRR_typ_2 409 432 IPR003591 -
Sebi31g00027 766 SMART LRR_typ_2 339 361 IPR003591 -
Sebi31g00027 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 215 IPR027417 -
Sebi31g00027 766 Gene3D Ribonuclease Inhibitor 257 480 IPR032675 -
Sebi31g00027 766 Gene3D Ribonuclease Inhibitor 576 721 IPR032675 -
Sebi31g00027 766 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 32 707 - -
Sebi31g00027 766 Pfam Leucine rich repeat 315 373 IPR001611 GO:0005515
Sebi31g00027 766 Pfam NB-ARC domain 103 214 IPR002182 GO:0043531
Sebi31g00027 766 SUPERFAMILY L domain-like 251 709 - -
Sebi31g00027 766 Gene3D - 54 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00027 Sebi-Chr31 388355 391293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00027 334 440 WRKY Transcription Factor Family AT4G12020 37.037 1.98e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00027 - K13459 ahf:114924594 609.372