Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00025 ATGCCGGTGAGGAAGGAGGATGAGGTGCAGGTGGTTCGTGGGACCTACAAGGGGCGTGAGGGTAAGGTGACTCAGGTTTACCGTCGCAAGTGGGTGATCCACATCGAGCGCATCACTCGCGAGAAGGTGAACGGCTCCACCGTCAATGTTGGAATCCACCCTTCCAAGGTTGTGATCACGAAGCTGAGGCTCGACAAGGATCGTAAGTCCCTTCTCGACCGGAAGGCCAAGGGTCGCGCCGCCGCTGATAAGGAGAAGGGCACCAAGTTCGCTCCAGAGGATATTATGCAGTCTGTAGATTAG 303 0.5644 MPVRKEDEVQVVRGTYKGREGKVTQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDRKAKGRAAADKEKGTKFAPEDIMQSVD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00025 100 ProSitePatterns Ribosomal protein L24 signature. 6 23 IPR005825 GO:0003735|GO:0005840|GO:0006412
Sebi31g00025 100 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 37 75 IPR005756 GO:0003735|GO:0006412|GO:0015934
Sebi31g00025 100 MobiDBLite consensus disorder prediction 74 91 - -
Sebi31g00025 100 NCBIfam 50S ribosomal protein L24 1 76 IPR005756 GO:0003735|GO:0006412|GO:0015934
Sebi31g00025 100 Pfam KOW motif 7 36 IPR005824 -
Sebi31g00025 100 Gene3D - 1 97 IPR014722 -
Sebi31g00025 100 CDD KOW_RPL26 7 59 IPR041988 GO:0003723
Sebi31g00025 100 SUPERFAMILY Translation proteins SH3-like domain 1 79 IPR008991 -
Sebi31g00025 100 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 95 IPR005756 GO:0003735|GO:0006412|GO:0015934
Sebi31g00025 100 MobiDBLite consensus disorder prediction 74 100 - -
Sebi31g00025 100 SMART kow_9 2 29 IPR005824 -
Sebi31g00025 100 FunFam 60S ribosomal protein L26 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00025 Sebi-Chr31 380208 380510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00025 1 100 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 89.000 9.22e-63 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00025 K02898 - gmx:100775705 169.474