Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00016 ATGGGTTATACGAATTCGGAGTTGCATGTGCGAATCTTTGTCACCTCCTTGGTGATTCTCACGGGGACTTTCTGTGCTGGAGACACTGACCTGGTTGATGTTGCAGCAATCAATAGTCTCTATTTTGCTCTGGGCTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGAGATCCTTGTTTGGAACAGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTGCCATACGACTTGCTGACATGAATTTGGGTGGACAGCTGGGCACTAATTTGAATTTCCCTTCCATTATAGAAATTGATCTTAGCAACAACCATATTGGAGGGGCCATTCCATTCACGTTGCCTCCTACAATGAGGAGCTTGTCTCTTGCAGGAAATCAGTTAAATGGGAGTATTCCAGATGCCTTATCCTTATTAACCCAATTGTCAAACTTGGATTTGTCAAATAACAACTTGAGTGGCCAGTTGCCTTCCTCAACAGGGAGTTTATCATCTCTTACCACACTACACTTGCAGAACAATCAACTTTCTGGGACCCTCTATGTTTTGCAGGACCTTCCTCTTCAGGATCTGAATATAGAGAATAATTTATTCTCTGGGCCAATTCCTCCAAAATTGTTGACTATCCCGAATTTCAGAAAAGATGGGAATCCATTTAATACAACTATCATTCCATCACCTCCAGCTGCAGCCCCTTCACCTGTAGCCATGGCTCCATCCCCTGAGGAATCACCTTGGAAAGTGGCAAATAGTCCTTCTGCCCTGACAGCACTGATGCCTGCAAATACTGGGAAGTCTTTCATAGCTAAGAATGTCATTTGGATTGCTGGTGCATGTTTCTTAATATTCATTGCATTGGGAATTTGTCTTTTTATGTTTTGGTGCTTTAAGAGAAGGCCAAAAAAGAAAAATGCTAAGAAACCTGATGTAGGTGTTTGTGCGAAACCTTTGCATAAACCTACATGCAGTGACACTGTTTTTGAAGCAACTAATGAAGAGGAAAAAGGACACGGTTCCAAACTTGCCCCCCTGCAGCCACCGCCATGTTCTCTCCCACCCATTCCTAGTGAGAAGGTCATCATCAATCCAGCTATAACTTCCAAAGTAACTGAAAAACAAGTTGTGACAAGTTCTGTCAAAGTTTATACTGTTGCATCACTTCAGCAGTATACAAGTAGTTTTTCCCAAGAAAATTGTATTGGGGAAGGCACGCTTGGGCCTGTTTATAGGGCTGAGCTCCCTGATGGACAGCTATTGGCAGTGAGGAAACTGGATGCTACTGCGTCCATGGGACAAAATCATGAACAATTTCTTCAATTGGTATCCAGCATCTCAAAAATTCAGCATGCTAATATTGCAAAGCTTGTGGGCTACTGTGCTGAGTATAGCCAACGACTACTTGTATACGAGTATTACAGTAATGGGACTCTACATGATGCACTGCATGGGGATAATGAACACCGTATTGAACTTCCATGGAATGCACGCATTAAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCGGCCACCGATTGTGCATCGAAATTTTAGGTCAGCTAATGTTCTCCTAAATGAAAAGTTGGAAGTGCGTGTCTCTGATTGTGGATTGGGTCCTTTACTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGCCTGCTTACAGCTTATGGTTACAGTGCTCCGGAATTTGAGTCTGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGAAGAAAATCCTATGACAGGTCACGGCCTCGTGGAGAGCAAATTTTGGTCAGATGGGCAGTTCCTCAACTTCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAATGGAGCCTATCCTATCAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGCGCGAACCTGAATTCCGGCCAGCTATGTCAGAAATTGTTCAAGATCTGTTGCTAACAATGTAA 2022 0.4352 MGYTNSELHVRIFVTSLVILTGTFCAGDTDLVDVAAINSLYFALGSPPLQGWKPVGGDPCLEQWQGVACVFSNITAIRLADMNLGGQLGTNLNFPSIIEIDLSNNHIGGAIPFTLPPTMRSLSLAGNQLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLTIPNFRKDGNPFNTTIIPSPPAAAPSPVAMAPSPEESPWKVANSPSALTALMPANTGKSFIAKNVIWIAGACFLIFIALGICLFMFWCFKRRPKKKNAKKPDVGVCAKPLHKPTCSDTVFEATNEEEKGHGSKLAPLQPPPCSLPPIPSEKVIINPAITSKVTEKQVVTSSVKVYTVASLQQYTSSFSQENCIGEGTLGPVYRAELPDGQLLAVRKLDATASMGQNHEQFLQLVSSISKIQHANIAKLVGYCAEYSQRLLVYEYYSNGTLHDALHGDNEHRIELPWNARIKVALGAARALEYLHENFRPPIVHRNFRSANVLLNEKLEVRVSDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDRSRPRGEQILVRWAVPQLHDIDALSKMVDPCLNGAYPIKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTM 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00016 673 Gene3D Phosphorylase Kinase; domain 1 359 472 - -
Sebi31g00016 673 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi31g00016 673 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 142 - -
Sebi31g00016 673 Pfam Protein tyrosine and serine/threonine kinase 398 669 IPR001245 GO:0004672|GO:0006468
Sebi31g00016 673 PRINTS Leucine-rich repeat signature 143 156 - -
Sebi31g00016 673 PRINTS Leucine-rich repeat signature 164 177 - -
Sebi31g00016 673 Gene3D Transferase(Phosphotransferase) domain 1 473 671 - -
Sebi31g00016 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 669 IPR046959 -
Sebi31g00016 673 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 363 472 - -
Sebi31g00016 673 SUPERFAMILY Protein kinase-like (PK-like) 374 670 IPR011009 -
Sebi31g00016 673 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 143 231 - -
Sebi31g00016 673 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 473 673 - -
Sebi31g00016 673 SUPERFAMILY L domain-like 33 211 - -
Sebi31g00016 673 Gene3D Ribonuclease Inhibitor 35 229 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00016 Sebi-Chr31 266109 271550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00016 33 670 Strubbelig Receptor Gene Family AT4G03390 51.928 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi31g00016 PK_Tyr_Ser-Thr 9.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi31g00016 - - gmx:100793423 1000.35