Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi31g00012 | ATGGCGGATGAGGGATTCGACTTCCAATTGGTGGACAACGGGGACGCCGCCGATGACGATAAGCTCTTCATGGATATCGATTCCATTCTCAGCGTTCTTGATGAAGATCGCGATCCTTCCGAGTATGATAATTTTATGGATATCATGCTGCAGAGTAGTCATGAGGATTCTTCATTGAAAGATGTTTCACCTAGTGAATCTGGCATCCTTGATAATTTTCTACTTCAAAATGGGAATTATGTGCTTGACTGCGAACATGAAAACCAGGTACCTTCATCACAGACTTGCTCTTCCCCAAATGCTTTTGCCGGTGGTTACAGAGGCTCTTTCTCTGTGGTTGAAAGTGATGACATTTGTCACACAGAAAGGACAGGAGTTTCTAAATGTGAGATACCTACTTACAGTGTGGACACGAATATCCGTGAGGCAAATTCAAACGTTGTAGTTGTTTGTGGAAATAATTTGAATCTGAGTCTGTGGAAGGGTGTAAATGATAGCCAAGTCAAGCATGTAGGAGATGATGTAGAATCTGAATATGCTTCACACAGCTCTATCATTGAGAACGTTGATGTAACCCTTGAAGATTATGGAACATTTTTGAAAGACGGTGTTGTAGTTTCTGGGAAGCAGGAAAATGACTTGTGTACATCATTTGAAATGTCGTTTGTGGATGCTGACAGAGCAACACATGTTGCAACTTCAACTGATTCTACTATTTGTCAAGGTTCCAATGTTCCAAGTGATTTTAGTGACTACTATTCATCTTTGAACTGTTACCAGAGTATTGATGATAGACTTGATGTTTCCAACACTCCTGGTTATTTTCCTAATGGTGTTTGTCCTCAATTCTGGAAAAATGAAGAGATGACAGGGAACATGAATGTTGCAAAAACGGAGTTTTTTGCTGATACAGCACGTGTGAGTAGTGGCTTGCATTCCAGCACTACTGGTGGAATATCTGTTCAAGATGGTCAATTTTTGTTAGGAGATAGTGAATATCCTTCATTTTTTCCTGGTAATGTTCTGTTTGAAGACAGTGCATCAGTGAAACTTTCAACTTGTGCTTCATATATTTCAAGTGAAAGCCCATCAGTTCATGTCAAAGCTGAAAATAATGACCGAATTATGCCTTACCAAGATTCTTTTCACAGTGATGATGCTGAGTTAAAGGCAGGTCAAGAGGTGAAACAATTTGCTGGTATTTCCCCTACTATTAGATGCCAGGGTTATGATTTTTTCAAGCACCAGGATAGTGGTGCAATTGTAACAGCCAGAAAAGTGAATTATTACCAAGATATTATGGATGAAACTGCTAATGAATTTCCACGGAACATTGGAAACTTGAATTTGAAGTCCTTAGACTTGTCTATTGCCCGAGCATCAGTTCCCAGTGGAAAGCAGTATAATTGTGTTACAAGGGAAGGGGAGGATAAAACCATTGGACATAAAAATATTGATACTCAACTTTCAAAAAGAAGTATTGGGAGATCCAATGTTGAGGATGACTCTGATGTTTGCATTATTGAAGACATCAGTCACCCTGCACCTATCAGTCGATGTGCAGAACTTGGGAATTCCCTTAGTATGTCACAATCTTCTAGATCTGGTTATACCCAACCTTATATGTTGGGAGGCACAAGATCGAAGGCGCGTGATGAGCAATACATTTTACGAGTTGCATTGCAGGATCTATCTCAGCCAAAGTCAGAAGTTAGTCCACCAGATGGACTGCTAGCAGTTCCACTTTTACGACATCAGAGAATCGCTTTATCTTGGATGGTTCAGAAGGAAACATCAAGTCTATACTGCTCAGGGGGTATTCTTGCAGATGATCAGGGTCTTGGGAAAACGGTGTCAACTATTGCTTTAATATTAAAGGAAAGACCTCCATTGCTTAAGACATGCAGCAATGCACCAAAAAGTGAATTAGAAACTTTAAATTTGGATGCAGATGATGACCTGATTCCTGAAAATAGTATAGTGAAGAAGGAATCTAATATGTGTCAGGATACATCTAGTATAAATCCAGTCACAAGCATGAGTTTGTTGGTGCATGGGAAAGGAAGGCCATCTGCGGGAACACTTATTGTTTGTCCGACTAGTGTCCTGCGACAATGGGCTGAGGAGTTGCATAATAAAGTGACCTGCAAAGCAAATCTCTCTGTGCTAGTGTACCATGGAAGCAATCGAACTAAAGATCCTTATGAGCTTGCCAAGTATGATGTTGTTCTGACGACTTATTCAATTGTTAGCATGGAGGTCCCTAAGCAACCTCTGGTTGACAAAGATGATGAAGAAAAAGGAATTTATGAAGATCATGCTGTAGCAAGTAGGAAAAGGAAATGCCCTCCTAGTTCTAGTAGGAGTGGCAAGAAGGGATTGCATAGCACAATGCTTGAGGCTGTTGCTCGTCCTCTTGCAAAGGTGGCTTGGTTTAGAGTTGTTTTGGATGAGGCCCAGAGTATAAAGAATCACAGAACTCAAGTTGCAAGGGCCTGTTGGGGTCTTCGAGCTAAACGTAGATGGTGTTTATCAGGGACTCCCATCCAGAATGCAATTGATGATCTCTACAGTTACTTTAGATTTTTAAGATATGATCCTTATGCTGTGTACACATCATTCTGTTCCACAATTAAGATCCCTATCAACAGAAATCCATCAAAGGGGTATAGAAAGCTACAGGCTGTTTTAAAGACGATAATGTTACGTCGGACAAAAGGCACACTTCTTGATGGTGAACCTATTATTTCCTTGCCACCTAAGTTTGTAGAGTTGAAAAAAGTAGATTTTTCACAGGAGGAACGTGATTTCTATTCAAGACTTGAGGCTGATTCACGTGCACAGTTTCAGGAATATGCTGATGCTGGAACTGTGAAGCAAAATTATGTCAACATTTTGTTAATGCTTCTGCGCCTTAGACAAGCTTGCGATCACCCTTTGCTTGTCAAGCGTTACAATTCTAACTCTCTTTGGAAATCTTCGGTTGAAATGGCCAAGAAGCTTCCTCAGGAACAACAATTATGTCTTCTAAAATGTTTAGAGGCTTCCTTGGCCCTCTGTGGTATCTGTAATGATCCTCCTGAAGATGCTGTTGTATCAGTCTGTGGTCATGTTTTTTGTAACCAGTGCATTTGCGAACATCTTACTGGTGATGACAATCAGTGCCCTACTACAAATTGCAGAACACGACTAAGCATGTCTTCGGTGTTTTCCAAAGCTACATTGAACTGTTCTTTATCTGACCAGGCTTGTGATCATTTGCCTGGTTGCTCCGGTTCTGAGGTGGAGGAATCTGAGCCTTGTTCTCAGACTCAGCCATGTGATTCTTCAAAAATAAAGGCTGCACTTGAGGTGTTGCAGTCATTGTCTAAGCCACAATGCCATAATTCTGAAAAAAATTGTGTACAGAGCACTTTTGGAGAAAGTAGTACTGATTGCCTTGGGAGCTCCTCTTGTCCTGACAATGGGAAATCCTGCAATGATTTTCCTGAGCATCAAAATGTGTTTATAGAGAGAAGCTCTAATGATTCAGTTGGTTCTGTAGGGGAGAAAGCTATAGTGTTTTCTCAGTGGACGAGGATGCTGGATTTGCTTGAAGCATGTCTTAAGAAATCTTCAATTCAATATAGAAGACTTGATGGAACAATGTCAGTCATTGCTAGAGATAAAGCTGTTAAAGATTTTAATACACTCCCTGAGGTATCAGTTATGATTATGTCTTTGAAGGCTGCCAGTCTTGGTCTGAACATGGTGGCAGCTTGCCATGTTCTAATGCTAGATCTATGGTGGAATCCTACAACTGAAGATCAAGCAATAGACAGAGCGCATCGAATTGGACAGACTCGTCCTGTTACAGTCTTGCGGTTAACTGTGAAAGATACAGTTGAAGACCGAATTTTAGCTCTGCAGCAAAAGAAGCGAAAGATGGTTGCATCTGCGTTTGGAGAGGATGGAACTGGTGGTCGTCAAAGCCGCCTTACAGTGGATGATTTAAAATACTTGTTCATGATGTGA | 4014 | 0.4081 | MADEGFDFQLVDNGDAADDDKLFMDIDSILSVLDEDRDPSEYDNFMDIMLQSSHEDSSLKDVSPSESGILDNFLLQNGNYVLDCEHENQVPSSQTCSSPNAFAGGYRGSFSVVESDDICHTERTGVSKCEIPTYSVDTNIREANSNVVVVCGNNLNLSLWKGVNDSQVKHVGDDVESEYASHSSIIENVDVTLEDYGTFLKDGVVVSGKQENDLCTSFEMSFVDADRATHVATSTDSTICQGSNVPSDFSDYYSSLNCYQSIDDRLDVSNTPGYFPNGVCPQFWKNEEMTGNMNVAKTEFFADTARVSSGLHSSTTGGISVQDGQFLLGDSEYPSFFPGNVLFEDSASVKLSTCASYISSESPSVHVKAENNDRIMPYQDSFHSDDAELKAGQEVKQFAGISPTIRCQGYDFFKHQDSGAIVTARKVNYYQDIMDETANEFPRNIGNLNLKSLDLSIARASVPSGKQYNCVTREGEDKTIGHKNIDTQLSKRSIGRSNVEDDSDVCIIEDISHPAPISRCAELGNSLSMSQSSRSGYTQPYMLGGTRSKARDEQYILRVALQDLSQPKSEVSPPDGLLAVPLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIALILKERPPLLKTCSNAPKSELETLNLDADDDLIPENSIVKKESNMCQDTSSINPVTSMSLLVHGKGRPSAGTLIVCPTSVLRQWAEELHNKVTCKANLSVLVYHGSNRTKDPYELAKYDVVLTTYSIVSMEVPKQPLVDKDDEEKGIYEDHAVASRKRKCPPSSSRSGKKGLHSTMLEAVARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYTSFCSTIKIPINRNPSKGYRKLQAVLKTIMLRRTKGTLLDGEPIISLPPKFVELKKVDFSQEERDFYSRLEADSRAQFQEYADAGTVKQNYVNILLMLLRLRQACDHPLLVKRYNSNSLWKSSVEMAKKLPQEQQLCLLKCLEASLALCGICNDPPEDAVVSVCGHVFCNQCICEHLTGDDNQCPTTNCRTRLSMSSVFSKATLNCSLSDQACDHLPGCSGSEVEESEPCSQTQPCDSSKIKAALEVLQSLSKPQCHNSEKNCVQSTFGESSTDCLGSSSCPDNGKSCNDFPEHQNVFIERSSNDSVGSVGEKAIVFSQWTRMLDLLEACLKKSSIQYRRLDGTMSVIARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKRKMVASAFGEDGTGGRQSRLTVDDLKYLFMM | 1337 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi31g00012 | 1337 | FunFam | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | 786 | 916 | - | - | |
| Sebi31g00012 | 1337 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 597 | 866 | IPR014001 | - | |
| Sebi31g00012 | 1337 | Pfam | Helicase conserved C-terminal domain | 1181 | 1279 | IPR001650 | - | |
| Sebi31g00012 | 1337 | Pfam | Zinc finger, C3HC4 type (RING finger) | 1020 | 1057 | IPR018957 | GO:0046872 | |
| Sebi31g00012 | 1337 | SMART | ring_2 | 1020 | 1058 | IPR001841 | - | |
| Sebi31g00012 | 1337 | FunFam | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | 676 | 763 | - | - | |
| Sebi31g00012 | 1337 | ProSitePatterns | Zinc finger RING-type signature. | 1035 | 1044 | IPR017907 | - | |
| Sebi31g00012 | 1337 | CDD | DEXDc_SHPRH-like | 582 | 904 | - | - | |
| Sebi31g00012 | 1337 | Gene3D | - | 552 | 645 | IPR038718 | - | |
| Sebi31g00012 | 1337 | ProSiteProfiles | Zinc finger RING-type profile. | 1020 | 1059 | IPR001841 | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi31g00012 | - | - | gmx:100805307 | 1904.03 |
Showing 1 to 1 of 1 entries