Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi31g00007 ATGGATTCATCTTCAGTCTCTGACTGTCAGCACCCGCAGCTCCCACCAGGGTTTCGCTTCCACCCCACAGATGAGGAACTAGTCGTTCACTACCTCAAGAGAAAAGCAGACTCTGCTCCTCTTCCTGTTTCCATCATAGCAGAGATTGATCTCTACAAGTTCGACCCATGGGAACTCCCAAGTAAGGCAAGTTTTGGTGAGCAAGAGTGGTACTTTTTCAGTCCAAGAGATAGGAAATACCCAAATGGAGCGAGGCCTAACAGGGCAGCTACTTCTGGCTATTGGAAAGCTACTGGAACTGACAAGCCTATACTAGCATCTGATGGGCATCACAAAGTTGGGGTCAAGAAAGCCCTTGTGTTCTATGGTGGGAAGCCTCCAAAAGGGGTTAAAACCAATTGGATTATGCATGAGTATAGACTTGCTGATAATAAGTCCTTGAATTCTACCTCAAAGACACCTTCTCCGGCCCCTGATCCTGCACGTAGTAACAAGAAGAACTCTTTGCGGCTTGACGATTGGGTTTTATGCCGAATATACAAGAAAAGCAATAGTAGCACCCAGCCAAGGCTACCTTTGATGGAGCAGGATAAGGAGCTTTCTTCAGAGACAGAGAGTATGCTACCAATGATGTCATCAACTCTGTCAATGGCTAATACGTATCAGAATTCCAAACCCACATGTTCGAGAAGTTTGAGTTATGGACCACTGGGAGATGACAACTTGTTCAATGGAATCATAGCAGTAGCAGCTGATCAGAATATGCAAAATGGTTCTGATTCCTACCATCAAGTCTCCAAGGGAAACTTGCCTATGAAAAGAGCAATACCATCACAGTATTGGAATATGGACACAGCAGGATCTCCATCTCCAGGGTCATCTTCTTCAAGCAGGCAATTCCATTGTGATCTTAATAATGGAAGCAGCAACGCTAACGCTGAGGAAAACAATTCCTTTATTTCTCTGCTTAATCACCTTCCACACACCTCAACTTTTCACCCAAATGCCCTTCTTGGTCATGATGATGATGGTGTCTTGAGGCAACAGTTTCAACTCCCAAGCATAAATTGGAACACATAG 1080 0.4463 MDSSSVSDCQHPQLPPGFRFHPTDEELVVHYLKRKADSAPLPVSIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASDGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNKSLNSTSKTPSPAPDPARSNKKNSLRLDDWVLCRIYKKSNSSTQPRLPLMEQDKELSSETESMLPMMSSTLSMANTYQNSKPTCSRSLSYGPLGDDNLFNGIIAVAADQNMQNGSDSYHQVSKGNLPMKRAIPSQYWNMDTAGSPSPGSSSSSRQFHCDLNNGSSNANAEENNSFISLLNHLPHTSTFHPNALLGHDDDGVLRQQFQLPSINWNT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi31g00007 359 ProSiteProfiles NAC domain profile. 14 182 IPR003441 GO:0003677|GO:0006355
Sebi31g00007 359 MobiDBLite consensus disorder prediction 145 162 - -
Sebi31g00007 359 FunFam NAC transcription factor 56 23 187 - -
Sebi31g00007 359 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Sebi31g00007 359 PANTHER NAC TRANSCRIPTION FACTOR 56 14 213 - -
Sebi31g00007 359 MobiDBLite consensus disorder prediction 283 308 - -
Sebi31g00007 359 SUPERFAMILY NAC domain 10 182 IPR036093 GO:0003677|GO:0006355
Sebi31g00007 359 Gene3D NAC domain 23 187 IPR036093 GO:0003677|GO:0006355
Sebi31g00007 359 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi31g00007 Sebi-Chr31 124202 125489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi31g00007 11 359 NAC Transcription Factor Family AT1G61110 53.631 1.34e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi31g00007 NAM 1e-39 No_clan