Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi319g00043 ATGGTGCTTGATAATATAGGATACATTGGAGGGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATTATGGTTGAATTGAATGGTAGGTTGAATAAGTGTGGGGTTATTAGTCCCCATTTTGATGTGGGTGTCAAAGAGATTGAAGGTTGGATTGTTAGGCTTCTCCCCTCAAGACAGGCACGGAAACCTGGAGATCTTGGAGTGGGTGCATTCTTTGAAAATGGACCCTTTAGACCAAATGGGGAGTTTTTGATTAAAAATGAGTATAGTTGGAACAAAGGTGCTCTTTTTCTCCACATTCCATTCTATCTGCCAGAATGGCCAGCATTCATTCTTCTACTGATTGAGTTACTTTGTTGTGTGTTGCATGTTATATTTGGAGACACCAATTGGAGTGGGGATCTCTTATGCTAA 417 0.4077 MVLDNIGYIGGFEYVDDHRAGKIMVELNGRLNKCGVISPHFDVGVKEIEGWIVRLLPSRQARKPGDLGVGAFFENGPFRPNGEFLIKNEYSWNKGALFLHIPFYLPEWPAFILLLIELLCCVLHVIFGDTNWSGDLLC 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi319g00043 138 PANTHER 40S RIBOSOMAL PROTEIN S15A 2 60 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sebi319g00043 138 Gene3D - 32 127 - -
Sebi319g00043 138 Gene3D - 1 31 - -
Sebi319g00043 138 SUPERFAMILY Ribosomal protein S8 2 60 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi319g00043 Sebi-Chr319 828395 829628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi319g00043 1 60 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 81.667 6.15e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi319g00043 K02957 - rcu:8261606 107.457