Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi319g00007 ATGGGCAGAGTGGCAAGTTGTTCTGTTCTTCTATCATTTCTCATTCTTTCATTCTTTGTGATTGAAATCCATGGAAGTAATAGACAAGTTAAGGCTCTTGACAAACTTCAAAAGTCAAAATTCAGAGGAAGTTCAGAAATTGATGTGAGTGAGTTTGAGGTACAAGAGGTTGTCCCTGATGCCATTGTTCATTCTCAAGAAGGACTGAAAGAGAAAGATAGGATTGAGAAGCTTCCAGGACAACCCCATGTGAGGTTTTCTCAGTATGGAGGGTATGTCACTGTAGATAAATTGGCTGGCAGTGCCTTTTACTATTACTTTGTTGAAGCTCAACATTCCAAAGAAACAAAGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCACTAGCCTATGGAGCAATGCAAGAACTTGGACCCTTTAGAGTAAACAGTGACGGCAAAACACTATACAGAAATAGATATTCATGGAACAATGTTGCAAATGTTCTGTTCCTGGAGTCACCTGTTGGAGTGGGATTTTCTTACTCAAACAGATCATCAGATTATAATGTGAATGGAGATAAGAAAACAGCTGCAGATAACTACTTGTTCTTGTTAAATTGGTTGGAGAGGTTTCCGGAATATAAGAATAGAGATTTCTATATTTCTGGGGAGAGTTATGCTGGCCATTATGTTCCTCAACTTGCACATACTATTCTCTATCATAACAAAAAGGCAAAAAAGACTATCATCAACCTCAAAGGAATCATGATTGGGAATGCAGTGATCAATGATGACACAGACTCTCAAGGATTGTATGATTATCTTGCAAGCCATGCAATAATCTCAGACCAAGCAGCATATGATATCACCAAAGCTTGTGATTTCTCAGCACGTAATCAGACAAAGGAGTGCCATGAAGCCGCTGATGAATTTGACAGTGATATTTCATTCATTGATTTATACAACATTTATGCTCCACTTTGCAAAAATTCCAATCTCACTGCCCGGCCCAAGAAGACCTCTCTTGTGATTGATCCATGTAGTGAGTATTATGTGTATGCATATCTTAATAGAGGAGATGTTCAAGAGGCCCTTCATGCCAATGTCACTAAGCTCAAATATGACTGGGAACCCTGCAGTGATGTCATTCAAAATTGGGTTGATAGCGCTTCAACAGTCCTTCCTATTTTACATGAATTCCTCAATAATGGCCTTAGAGTTTGGGTTTTCAGTGGTGACACAGATGGAAGGGTACCTATTACTTCAACAAAGTATTCAATTAACAAGATGAAGCTTCCCATTAAAACTGCTTGGCACCCTTGGTTTGCCTATGGAGAGGTTGGTGGGTATGCAGAAGTATACAAGGGAGGCCTAACACTTGCAACAGTGAGAGATGCAGGGCATCAAGTGCCAAGTTACCAACCAGCAAGAGCCCTTGTTTTGATCAAAAGTTTCTTAGATGGCACTCTTATTTCTAATCCCAAAACACATGCTTAG 1488 0.3985 MGRVASCSVLLSFLILSFFVIEIHGSNRQVKALDKLQKSKFRGSSEIDVSEFEVQEVVPDAIVHSQEGLKEKDRIEKLPGQPHVRFSQYGGYVTVDKLAGSAFYYYFVEAQHSKETKPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLYRNRYSWNNVANVLFLESPVGVGFSYSNRSSDYNVNGDKKTAADNYLFLLNWLERFPEYKNRDFYISGESYAGHYVPQLAHTILYHNKKAKKTIINLKGIMIGNAVINDDTDSQGLYDYLASHAIISDQAAYDITKACDFSARNQTKECHEAADEFDSDISFIDLYNIYAPLCKNSNLTARPKKTSLVIDPCSEYYVYAYLNRGDVQEALHANVTKLKYDWEPCSDVIQNWVDSASTVLPILHEFLNNGLRVWVFSGDTDGRVPITSTKYSINKMKLPIKTAWHPWFAYGEVGGYAEVYKGGLTLATVRDAGHQVPSYQPARALVLIKSFLDGTLISNPKTHA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi319g00007 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Sebi319g00007 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Sebi319g00007 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Sebi319g00007 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Sebi319g00007 495 FunFam Carboxypeptidase 390 485 - -
Sebi319g00007 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Sebi319g00007 495 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Sebi319g00007 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 472 IPR001563 GO:0004185|GO:0006508
Sebi319g00007 495 FunFam Carboxypeptidase 69 327 - -
Sebi319g00007 495 Pfam Serine carboxypeptidase 80 485 IPR001563 GO:0004185|GO:0006508
Sebi319g00007 495 SUPERFAMILY alpha/beta-Hydrolases 72 488 IPR029058 -
Sebi319g00007 495 Gene3D - 390 485 - -
Sebi319g00007 495 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Sebi319g00007 495 Gene3D - 344 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi319g00007 Sebi-Chr319 160328 163777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi319g00007 352 485 Calmodulin-binding Proteins AT2G22960 28.358 8.01e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi319g00007 K16297 - gmx:100783864 792.727