Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi318g00062 ATGGAAGGAATACCGCACCCAATACCCAGAACTGTTGAGGAGGTTTTCAGCGACTTTAAGGGCAGACGTGCTGGATTGATCAAGGCCCTCACTACAGACGTTGAAAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAATTTGTGTCTATATGGATTTCCAAATGAAACATGGGAAGTGAATTTGCCTGTTGAGGAAGTGCCTCCTGAACTTCCTGAGCCAGCATTAGGTATAAACTTTGCTAGGGATGGTATGCAAGAGAAGGACTGGTTATCACTGGTTGCAGTTCACAGTGACTCGTGGCTGCTTGCTGTTGCTTTCTATTTCGGTGCCCGCTTTGGATTTGGTAAGAATGAAAGAACTCGTTTCCTCAACTTCTCGCCATCTTTCACTCCAAAAAGAGTTTAG 408 0.4534 MEGIPHPIPRTVEEVFSDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERTRFLNFSPSFTPKRV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi318g00062 135 PANTHER CPG BINDING PROTEIN 9 125 IPR045104 GO:0006355|GO:0042393
Sebi318g00062 135 Pfam Alfin 11 125 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi318g00062 Sebi-Chr318 595349 597129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi318g00062 1 123 Alfin-like Transcription Factor Family AT2G02470 91.057 3.77e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi318g00062 K26274 - gmx:100170698 236.498