Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi318g00053 ATGGCAAGCCTAAGTGTAGTTGAACAAGATAATAAGCTGAAGCTGTATTCATATTGGAGGAGCTCATGTTCCTTCCGAGTCCGAATTGCTCTCAATCTCAAAGGGCTCAAATATGAGTACAAACCAGTCAATCTGTTGAAGGGAGAAAATTCTCACCCTGAGTTTCTCGAGCTCAACCCTGTTGGTTTTGTCCCCGTTCTGGTGGATGGCCATGCTGTAATTTCTGACTCTTTCGCCATCATTATGTATTTGGAGGATAAGTATCCACACCATCCTTTGCTACCAAGTGATATTCATAAAAGAGCAATCAATTTCCAGGCTGCCAGTATTGTTTCCTCATCAATACAACCTCTTCAAAACCTAAGTTTACTGAATTACATCGAGGAAAAAGTTAGCCCTGATGAAAAACTTCCTTGGGCTCAACGTGTAATTAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAACACACAGGAAAATATGCAACTGGAGATGAAGTTTTCCTGGCGGATATATTTTTAGCACCTCAATTATATGCTGCATTTAAGAAATTCAACACTGACAAGAACGAGTTCCCTATTCTATCAAGATTACATGAGACATATTATGCGATCCCAGCATTCCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGCTATTCGTTTAGCTTTTCACATAGTGTGGGATGGAGGATACCTTAAAATTTGGGTGGAGTGTAGAGATTTGCTAGATTGGATTGCAAATTTCGCACATGAACTTCCTTTGAGTTTGCATGTTCTACCAACACCGCCTCCTGATTCTTATGTTCTTGGAGTTGTCCGTCCAAACCGCTCTAAATTGTCAAATGTGATAGTGAGTGATGGATGCCAAAATGTTGACTTGTCTTGTCAACCCTTAGCAACTGGTGAAAACAATCTGAAGCTATATTCTCACTGGATGAGCTCTTGTTCCTTCCGTGTTCGATTTGCTCTCAACCTCAAAGGTCTGAAATATGAGTACGAAGCATGCAATCTCCAACGAATTTCTGACCCCGAGTTTCAGAAGCTCAATCCTGTTGGGTATGTTCCCGTGCTGGTGGATGGTGATGTAGTAATTGTTGACTCTTTTGCCATTATTATGTATTTGGAAGATAAGTATCCTCACCATCCTCTGCTGCCTCATGATATTCATAAAAGAGCAATCAATTTCCAGGTTGCCAATATTGTTTCCTCAGCTATACAGCCTTTTCAAAACTTCACTGTAGCGAAGTACATTGAGGAAAAGGTTGGCCCAGATGAAAAACTTCCTTGGACCCAGAGTGTAATCGGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGACCATGCAAGAAGATATGCAACTGGAGATGAAATTTTCCTGGCCGATTTGTTTTTAGCACCTCAGTTATATGCAGCAGTTATAAGATTCAACCTTGACATGAAGGAATTCCCTATTCTGTCAAGATTATATGAGGCATATAATGAGATTCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGTACACTGA 1548 0.4121 MASLSVVEQDNKLKLYSYWRSSCSFRVRIALNLKGLKYEYKPVNLLKGENSHPEFLELNPVGFVPVLVDGHAVISDSFAIIMYLEDKYPHHPLLPSDIHKRAINFQAASIVSSSIQPLQNLSLLNYIEEKVSPDEKLPWAQRVIRKGFTALEKLLKEHTGKYATGDEVFLADIFLAPQLYAAFKKFNTDKNEFPILSRLHETYYAIPAFREALPENQPDAAIRLAFHIVWDGGYLKIWVECRDLLDWIANFAHELPLSLHVLPTPPPDSYVLGVVRPNRSKLSNVIVSDGCQNVDLSCQPLATGENNLKLYSHWMSSCSFRVRFALNLKGLKYEYEACNLQRISDPEFQKLNPVGYVPVLVDGDVVIVDSFAIIMYLEDKYPHHPLLPHDIHKRAINFQVANIVSSAIQPFQNFTVAKYIEEKVGPDEKLPWTQSVIGKGFTALEKLLKDHARRYATGDEIFLADLFLAPQLYAAVIRFNLDMKEFPILSRLYEAYNEIPAFREALPENQPDAVH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi318g00053 515 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 306 385 IPR004045 -
Sebi318g00053 515 SUPERFAMILY Thioredoxin-like 11 95 IPR036249 -
Sebi318g00053 515 NCBIfam maleylacetoacetate isomerase 309 513 IPR005955 GO:0003824|GO:0005737|GO:0009072
Sebi318g00053 515 NCBIfam maleylacetoacetate isomerase 14 220 IPR005955 GO:0003824|GO:0005737|GO:0009072
Sebi318g00053 515 Gene3D Glutaredoxin 305 389 - -
Sebi318g00053 515 Gene3D Glutaredoxin 10 95 - -
Sebi318g00053 515 SFLD Main (cytGST) 308 497 - -
Sebi318g00053 515 SFLD Main (cytGST) 13 202 - -
Sebi318g00053 515 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 390 515 IPR010987 -
Sebi318g00053 515 CDD GST_N_Zeta 13 85 IPR034333 -
Sebi318g00053 515 CDD GST_C_Zeta 392 510 IPR034330 -
Sebi318g00053 515 Pfam Glutathione S-transferase, N-terminal domain 311 383 IPR004045 -
Sebi318g00053 515 Pfam Glutathione S-transferase, N-terminal domain 15 90 IPR004045 -
Sebi318g00053 515 FunFam Glutathione S-transferase Z1 306 388 - -
Sebi318g00053 515 FunFam Maleylacetoacetate isomerase 389 515 - -
Sebi318g00053 515 Gene3D - 96 222 - -
Sebi318g00053 515 Gene3D - 390 515 - -
Sebi318g00053 515 CDD GST_C_Zeta 99 217 IPR034330 -
Sebi318g00053 515 PANTHER MALEYLACETOACETATE ISOMERASE 13 220 - -
Sebi318g00053 515 Pfam Glutathione S-transferase, C-terminal domain 130 209 IPR004046 -
Sebi318g00053 515 Pfam Glutathione S-transferase, C-terminal domain 427 503 IPR004046 -
Sebi318g00053 515 SUPERFAMILY GST C-terminal domain-like 92 220 IPR036282 -
Sebi318g00053 515 FunFam Glutathione S-transferase Z1 11 95 - -
Sebi318g00053 515 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 11 92 IPR004045 -
Sebi318g00053 515 SUPERFAMILY GST C-terminal domain-like 385 513 IPR036282 -
Sebi318g00053 515 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 222 IPR010987 -
Sebi318g00053 515 FunFam Maleylacetoacetate isomerase 96 223 - -
Sebi318g00053 515 SFLD Glutathione Transferase (cytosolic) 13 202 IPR040079 -
Sebi318g00053 515 SFLD Glutathione Transferase (cytosolic) 308 497 IPR040079 -
Sebi318g00053 515 SUPERFAMILY Thioredoxin-like 304 388 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi318g00053 Sebi-Chr318 490532 498795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi318g00053 305 513 Glutathione S-transferase Gene Family AT2G02380 60.664 1.63e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi318g00053 K01800 - gmx:547590 360.918