Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi318g00034 ATGTCGACATTGGAAAGGGAGCATGACGAGTGCTTGCACCACGATTCCGATGAAGAAAGCTCCAGTTGGAGTTGCGGTTTAATTGGGCCCAAGAGGAACCAAGTCTTTGATTCAGAGGAGCTGTTTGAGATCAATCTGAATTTGAAGGAGAAGGAGCCTCCTTTGGATACAATAAGAGAAGAAGACTGCGAGAGCACCGTGTTCTCTCTTGATATTCACAACAAAGATAAAGATGTCGTTTATGTGGCAGTGGGCGACGGTGGAGATTCAAGCATGGAAGCGCTTTCATGGGCCTTGAACCACGCCGTAACACCCTCTACCACCGTTTGCCTCATACACGTTTTCCCTCAAGTCAAGCTCATTCCGAGTCCATTGGGAAAAATTCCAAGGAGCCACGTAAATCTAGAGCATGTTAACATCTACTTGACCCAAGAGAAAGGCAAGAGGAAATTGCTACTTCAAAAGTTCACTGACCTATGCATTGATTCAAAGGTTAAGGTGGAGATGATGCTTATTGAGGGTGACAATGTTGCTAAAGTCATCGTGGACCTTGTCGGGAATCTGAATATAAGGAAATTGGTAATTGGAACCACCAAATCTAATTTAAGGTGCCATGCCTGA 621 0.4477 MSTLEREHDECLHHDSDEESSSWSCGLIGPKRNQVFDSEELFEINLNLKEKEPPLDTIREEDCESTVFSLDIHNKDKDVVYVAVGDGGDSSMEALSWALNHAVTPSTTVCLIHVFPQVKLIPSPLGKIPRSHVNLEHVNIYLTQEKGKRKLLLQKFTDLCIDSKVKVEMMLIEGDNVAKVIVDLVGNLNIRKLVIGTTKSNLRCHA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi318g00034 206 MobiDBLite consensus disorder prediction 1 23 - -
Sebi318g00034 206 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 38 203 - -
Sebi318g00034 206 MobiDBLite consensus disorder prediction 1 20 - -
Sebi318g00034 206 Pfam Universal stress protein family 86 202 IPR006016 -
Sebi318g00034 206 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 85 199 - -
Sebi318g00034 206 Gene3D HUPs 79 203 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi318g00034 Sebi-Chr318 323879 324960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi318g00034 80 198 U-box Gene Family AT2G45910 33.613 1.34e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi318g00034 - - ccaj:109811414 271.552